HHsearch alignment for GI: 254780694 and conserved domain: PRK10403

>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.89  E-value=6.8e-22  Score=159.42  Aligned_cols=207  Identities=14%  Similarity=0.068  Sum_probs=126.1

Q ss_pred             HHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHH
Q ss_conf             11000221445888876553023213799997327999999999999987193023000266631112321000689589
Q gi|254780694|r    6 QQVNIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFD   85 (246)
Q Consensus         6 ~~~~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~   85 (246)
T Consensus         5 ~pirIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~----~~-----------pDlvllD~~lp~~~G~~   69 (215)
T PRK10403          5 TPFQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR----LD-----------IDVILLDLNMKGMSGLD   69 (215)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHH----CC-----------CCEEEECCCCCCCCCCC
T ss_conf             9757999839899999999999758992899998999999999864----49-----------98999808998998741


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999966984517389999852324430325433332144571475033736899999997178754698999999999
Q gi|254780694|r   86 LVRCMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLL  165 (246)
Q Consensus        86 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (246)
T Consensus        70 ~~~~l~~~~-----p~~~i---ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G~~~~~~~~~~~l~--  139 (215)
T PRK10403         70 TLNALRRDG-----VTAQI---IILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLR--  139 (215)
T ss_pred             HHHHHHHCC-----CCCCE---EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH--
T ss_conf             233565418-----87736---88632432367899874687668848999999999999998499847989999998--


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf             999997542014677988888977999999998599979999994999889999999999980799889999999975
Q gi|254780694|r  166 AAYQANMFKSYDVHWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRN  243 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~  243 (246)
T Consensus       140 -----~~-~~~~~~~~~~~~LT~RE~eVL~lla~G~snkeIA~~L~iS~~TV~~h~~~I~~KLgv~nR~ea~~~~~~~  211 (215)
T PRK10403        140 -----ER-EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ  211 (215)
T ss_pred             -----HH-HCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             -----74-2124667744568999999999998699999999997982999999999999986899899999999998