HHsearch alignment for GI: 254780694 and conserved domain: PRK10403
>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.89 E-value=6.8e-22 Score=159.42 Aligned_cols=207 Identities=14% Similarity=0.068 Sum_probs=126.1
Q ss_pred HHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHH
Q ss_conf 11000221445888876553023213799997327999999999999987193023000266631112321000689589
Q gi|254780694|r 6 QQVNIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFD 85 (246)
Q Consensus 6 ~~~~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (246)
T Consensus 5 ~pirIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~----~~-----------pDlvllD~~lp~~~G~~ 69 (215)
T PRK10403 5 TPFQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR----LD-----------IDVILLDLNMKGMSGLD 69 (215)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHH----CC-----------CCEEEECCCCCCCCCCC
T ss_conf 9757999839899999999999758992899998999999999864----49-----------98999808998998741
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99999966984517389999852324430325433332144571475033736899999997178754698999999999
Q gi|254780694|r 86 LVRCMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLL 165 (246)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (246)
T Consensus 70 ~~~~l~~~~-----p~~~i---ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G~~~~~~~~~~~l~-- 139 (215)
T PRK10403 70 TLNALRRDG-----VTAQI---IILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLR-- 139 (215)
T ss_pred HHHHHHHCC-----CCCCE---EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH--
T ss_conf 233565418-----87736---88632432367899874687668848999999999999998499847989999998--
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 999997542014677988888977999999998599979999994999889999999999980799889999999975
Q gi|254780694|r 166 AAYQANMFKSYDVHWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRN 243 (246)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~ 243 (246)
T Consensus 140 -----~~-~~~~~~~~~~~~LT~RE~eVL~lla~G~snkeIA~~L~iS~~TV~~h~~~I~~KLgv~nR~ea~~~~~~~ 211 (215)
T PRK10403 140 -----ER-EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 (215)
T ss_pred -----HH-HCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf -----74-2124667744568999999999998699999999997982999999999999986899899999999998