HHsearch alignment for GI: 254780694 and conserved domain: PRK10701

>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=96.61  E-value=0.0015  Score=41.61  Aligned_cols=115  Identities=16%  Similarity=0.058  Sum_probs=68.1

Q ss_pred             HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHH--HHHHH-----HHCCCCCCCCCCCCH
Q ss_conf             54333321445714750337368999999971787546989-99999999999--99754-----201467798888897
Q gi|254780694|r  117 PENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRD-RLWEIGLLAAY--QANMF-----KSYDVHWGKDFELTG  188 (246)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~LT~  188 (246)
T Consensus        85 ~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~~~~~~~~~~~~~~~~~~~~g~l~ld~~~~~v~~~g~~i~LT~  164 (240)
T PRK10701         85 MNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATQAKGLQETSLTPYKALHFGTLTIDPINRVVTLAGEEISLST  164 (240)
T ss_pred             HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEECCH
T ss_conf             88999997688776417998799999999999653254443222345557664389877999888899999999987678


Q ss_pred             HHHHHHHHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCC
Q ss_conf             799999999859----9979999994-----999889999999999980799
Q gi|254780694|r  189 REVECLTWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATK  231 (246)
Q Consensus       189 RE~eVl~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~  231 (246)
T Consensus       165 ~E~~lL~~L~~~~g~vvsre~L~~~vwg~~~~~~~rtvdv~I~rLRkKl~~~  216 (240)
T PRK10701        165 ADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDN  216 (240)
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             9999999999779987389999998539887888678999999999987528