HHsearch alignment for GI: 254780694 and conserved domain: PRK10816

>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional.
Probab=96.58  E-value=0.0017  Score=41.29  Aligned_cols=111  Identities=11%  Similarity=0.170  Sum_probs=71.9

Q ss_pred             HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             54333321445714750337368999999971787546989999999999999975420146779888889779999999
Q gi|254780694|r  117 PENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGREVECLTW  196 (246)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~l  196 (246)
T Consensus        85 ~~~~~al~~Gaddyl~KP~~~~eL~arv~~~lrr~~~~~~~~~~----~~~~~~d~~~~~~~~~g~~i~LT~~E~~LL~~  160 (223)
T PRK10816         85 QDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVIS----LPPFQVDLSRRELSINDEVIKLTAFEYTIMET  160 (223)
T ss_pred             HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEE----ECCEEEEHHHCEEEECCEEEEECHHHHHHHHH
T ss_conf             78999998699886418977789999999996655578776188----78868711005898799899706899999999


Q ss_pred             HHCC----CCHHHHHHHHC-----CCHHHHHHHHHHHHHHHCCC
Q ss_conf             9859----99799999949-----99889999999999980799
Q gi|254780694|r  197 ISEG----KTSDEIAVILG-----ISRNTVNNYIASIMRKTATK  231 (246)
Q Consensus       197 ia~G----~t~~eIA~~L~-----iS~~TV~~hl~~i~~KLgv~  231 (246)
T Consensus       161 L~~~~~~vvsre~l~~~vw~~~~~~~~~sld~~I~rLRkKl~~~  204 (223)
T PRK10816        161 LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQ  204 (223)
T ss_pred             HHHCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             99879923839999998549987888677999999999974335