HHsearch alignment for GI: 254780694 and conserved domain: PRK12427

>PRK12427 flagellar biosynthesis sigma factor; Provisional.

Probab=97.29  E-value=0.00067  Score=43.89  Aligned_cols=47  Identities=19%  Similarity=0.258  Sum_probs=43.3

Q ss_pred             CCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             8889779999999-9859997999999499988999999999998079
Q gi|254780694|r  184 FELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKTAT  230 (246)
Q Consensus       184 ~~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv  230 (246)
T Consensus       180 ~~L~erEr~Vi~l~y~e~ltlkEIa~~LgvS~~RVsQi~~kal~kLR~  227 (229)
T PRK12427        180 SQLDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKS  227 (229)
T ss_pred             HHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             719999999999980589989999999798899999999999999884