HHsearch alignment for GI: 254780694 and conserved domain: PRK13719

>PRK13719 conjugal transfer transcriptional regulator TraJ; Provisional.
Probab=96.09  E-value=0.0073  Score=37.23  Aligned_cols=60  Identities=18%  Similarity=0.280  Sum_probs=55.2

Q ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r  187 TGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV  246 (246)
Q Consensus       187 T~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli  246 (246)
T Consensus       147 ~~~~~~vf~~Ys~G~SH~~ia~~L~It~~sSkn~~s~i~k~~gissrde~l~~l~~s~~~  206 (220)
T PRK13719        147 TSIQYDVFILYSFGFSHNSIASLLNITNGSSKNKISEILKFFGISSRDELLIILHTSEMI  206 (220)
T ss_pred             EEEEEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             200466898875242468899884741354077999999972988599999999997689