HHsearch alignment for GI: 254780694 and conserved domain: cd00090

>cd00090 HTH_ARSR Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.

Probab=96.03  E-value=0.018  Score=34.74  Aligned_cols=41  Identities=29%  Similarity=0.409  Sum_probs=36.8

Q ss_pred             CC-HHHHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             89-7799999999859-99799999949998899999999999
Q gi|254780694|r  186 LT-GREVECLTWISEG-KTSDEIAVILGISRNTVNNYIASIMR  226 (246)
Q Consensus       186 LT-~RE~eVl~lia~G-~t~~eIA~~L~iS~~TV~~hl~~i~~  226 (246)
T Consensus         4 l~~~~r~~Il~~L~~~~~~~~eia~~l~is~~~vs~hL~~L~~   46 (78)
T cd00090           4 LSDPTRLRILRLLLEGPLTVSELAERLGLSQSTVSRHLKKLEE   46 (78)
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             2799999999999848906999987778487899999999998