HHsearch alignment for GI: 254780694 and conserved domain: pfam01371
>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=95.32 E-value=0.026 Score=33.75 Aligned_cols=40 Identities=25% Similarity=0.165 Sum_probs=32.2
Q ss_pred CCCHHHH-------HHHH-HHHCCCCHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 8897799-------9999-99859997999999499988999999999
Q gi|254780694|r 185 ELTGREV-------ECLT-WISEGKTSDEIAVILGISRNTVNNYIASI 224 (246)
Q Consensus 185 ~LT~RE~-------eVl~-lia~G~t~~eIA~~L~iS~~TV~~hl~~i 224 (246)
T Consensus 26 l~T~~E~~ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRvsr~L 73 (88)
T pfam01371 26 LLTPDEREALAQRLRIAKELLRGELSQREIAQELGASIATITRGSNCL 73 (88)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 399999999999999999999789989999998598523147889998