HHsearch alignment for GI: 254780694 and conserved domain: pfam01978
>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.
Probab=94.54 E-value=0.12 Score=29.53 Aligned_cols=45 Identities=29% Similarity=0.364 Sum_probs=39.4
Q ss_pred CCCCCHHHHHHHHHHH-CC-CCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 8888977999999998-59-997999999499988999999999998
Q gi|254780694|r 183 DFELTGREVECLTWIS-EG-KTSDEIAVILGISRNTVNNYIASIMRK 227 (246)
Q Consensus 183 ~~~LT~RE~eVl~lia-~G-~t~~eIA~~L~iS~~TV~~hl~~i~~K 227 (246)
T Consensus 3 ~~Gls~~E~~vY~~Ll~~g~~t~~eia~~~~i~r~~vY~~L~~L~~k 49 (68)
T pfam01978 3 KLGLSEYEAKVYLALLKLGPATADEIAEESGVPRSKVYEVLRSLEKK 49 (68)
T ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 23989999999999998199889999999598898999999999988