HHsearch alignment for GI: 254780694 and conserved domain: pfam09339
>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=91.03 E-value=0.69 Score=24.57 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHC---CCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 779999999985---999799999949998899999999999
Q gi|254780694|r 188 GREVECLTWISE---GKTSDEIAVILGISRNTVNNYIASIMR 226 (246)
Q Consensus 188 ~RE~eVl~lia~---G~t~~eIA~~L~iS~~TV~~hl~~i~~ 226 (246)
T Consensus 3 ~r~l~iL~~~~~~~~~~~l~eia~~~gl~kstv~RlL~tL~~ 44 (52)
T pfam09339 3 DRALAILEALAEAPGGLSLTEIARRTGLPKSTAHRLLQTLVE 44 (52)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 999999999862899989999999989199999999999998