HHsearch alignment for GI: 254780694 and conserved domain: pfam09339

>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=91.03  E-value=0.69  Score=24.57  Aligned_cols=39  Identities=23%  Similarity=0.411  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHC---CCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             779999999985---999799999949998899999999999
Q gi|254780694|r  188 GREVECLTWISE---GKTSDEIAVILGISRNTVNNYIASIMR  226 (246)
Q Consensus       188 ~RE~eVl~lia~---G~t~~eIA~~L~iS~~TV~~hl~~i~~  226 (246)
T Consensus         3 ~r~l~iL~~~~~~~~~~~l~eia~~~gl~kstv~RlL~tL~~   44 (52)
T pfam09339         3 DRALAILEALAEAPGGLSLTEIARRTGLPKSTAHRLLQTLVE   44 (52)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             999999999862899989999999989199999999999998