HHsearch alignment for GI: 254780694 and conserved domain: smart00347
>smart00347 HTH_MARR helix_turn_helix multiple antibiotic resistance protein.
Probab=93.82 E-value=0.18 Score=28.33 Aligned_cols=46 Identities=26% Similarity=0.306 Sum_probs=40.0
Q ss_pred CCCCCCHHHHHHHHHHH--CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 88888977999999998--59997999999499988999999999998
Q gi|254780694|r 182 KDFELTGREVECLTWIS--EGKTSDEIAVILGISRNTVNNYIASIMRK 227 (246)
Q Consensus 182 ~~~~LT~RE~eVl~lia--~G~t~~eIA~~L~iS~~TV~~hl~~i~~K 227 (246)
T Consensus 4 ~~~glt~~q~~vL~~l~~~~~~t~~~la~~l~~~~~~vs~~v~~L~~~ 51 (101)
T smart00347 4 KPLGLTPTQFLVLRILYEEGPLSVSELAKRLGVSPSTVTRVLDRLEKK 51 (101)
T ss_pred HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 113949999999999997699799999999896887999999999458