HHsearch results for GI: 254780694 and protein with PDBid: 1l0o_C

>1l0o_C Sigma factor; bergerat fold, helix-turn-helix, protein binding; HET: ADP; 2.90A {Geobacillus stearothermophilus} SCOP: a.4.13.2

Probab=97.17  E-value=4.7e-05  Score=49.91  Aligned_cols=45  Identities=27%  Similarity=0.282  Sum_probs=42.3

Q ss_pred             CCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             8889779999999-98599979999994999889999999999980
Q gi|254780694|r  184 FELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKT  228 (246)
Q Consensus       184 ~~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  228 (246)
                      ..|+++|++|+.+ ..+|+|.+|||..|+||+.+|+...+++.+||
T Consensus       197 ~~L~~~er~Vi~l~y~~~~t~~EIA~~lgiS~~rV~qi~~~Al~kL  242 (243)
T 1l0o_C          197 EELDERERLIVYLRYYKDQTQSEVASRLGISQVQMSRLEKKILQHI  242 (243)
T ss_dssp             ----------------------------------------------
T ss_pred             HHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             8599999999999806999899999998949999999999999862