Query gi|254780695|ref|YP_003065108.1| flagellar MS-ring protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 563 No_of_seqs 144 out of 1037 Neff 8.2 Searched_HMMs 13730 Date Wed Jun 1 08:18:09 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780695.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2hfva1 d.58.5.5 (A:23-97) Hyp 94.6 0.043 3.1E-06 30.0 6.1 58 48-105 1-70 (75) 2 d1ic8a2 a.35.1.1 (A:87-180) He 61.7 3.5 0.00026 17.3 3.3 29 524-552 11-39 (94) 3 d1lxja_ d.58.48.1 (A:) Hypothe 60.4 4 0.00029 16.9 4.3 49 58-106 24-76 (104) 4 d1zhva2 d.58.18.8 (A:62-127) H 58.4 4.3 0.00032 16.7 4.4 44 59-102 18-63 (66) 5 d1mwwa_ d.80.1.4 (A:) Hypothet 55.1 4.9 0.00036 16.3 10.5 84 127-210 14-100 (120) 6 d1yqha1 d.58.48.1 (A:1-101) Hy 51.0 5.7 0.00041 15.9 5.2 57 49-105 12-73 (101) 7 d1lxna_ d.58.48.1 (A:) Hypothe 50.4 5.8 0.00042 15.8 4.4 50 57-106 19-73 (99) 8 d1pg4a_ e.23.1.1 (A:) Acetyl-C 43.0 7.5 0.00054 15.1 7.7 13 198-210 287-299 (643) 9 d3proc2 d.52.1.1 (C:86-163) Al 41.2 8 0.00058 14.9 2.6 73 138-216 5-78 (78) 10 d1vk8a_ d.58.48.1 (A:) Hypothe 40.9 8 0.00059 14.9 5.0 47 58-104 20-69 (93) 11 d2h7xa1 c.69.1.22 (A:9-291) Pi 39.5 8.5 0.00062 14.7 2.8 19 534-552 263-281 (283) 12 d1zd3a2 c.69.1.11 (A:225-547) 38.7 7.9 0.00058 14.9 2.1 22 534-555 300-321 (322) 13 d1uk8a_ c.69.1.10 (A:) Meta-cl 38.7 8.7 0.00063 14.6 2.4 19 534-552 252-270 (271) 14 d1s0ya_ d.80.1.1 (A:) Trans-3- 38.5 8.7 0.00064 14.6 4.4 36 175-210 3-41 (62) 15 d2rhwa1 c.69.1.10 (A:4-286) 2- 38.1 8.9 0.00065 14.6 3.0 19 534-552 264-282 (283) 16 d1otfa_ d.80.1.1 (A:) 4-oxaloc 37.5 9.1 0.00066 14.5 4.4 36 175-210 3-41 (59) 17 d1zvpa2 d.58.18.9 (A:68-131) H 30.3 12 0.00086 13.8 3.7 40 60-99 20-61 (64) 18 d1bn7a_ c.69.1.8 (A:) Haloalka 29.5 12 0.00089 13.7 1.9 19 534-552 271-289 (291) 19 d1mo2a_ c.69.1.22 (A:) Erythro 28.7 7.7 0.00056 15.0 0.7 18 534-551 237-254 (255) 20 d1brta_ c.69.1.12 (A:) Bromope 27.7 13 0.00095 13.5 2.8 19 534-552 259-277 (277) 21 d2aw0a_ d.58.17.1 (A:) Menkes 27.6 13 0.00092 13.6 1.6 43 137-193 19-63 (72) 22 d1uiza_ d.80.1.3 (A:) Micropha 27.1 13 0.00097 13.4 6.3 76 134-210 18-98 (115) 23 d1w07a2 a.29.3.2 (A:462-659) A 26.9 5.5 0.0004 16.0 -0.3 54 181-234 114-172 (198) 24 d1m33a_ c.69.1.26 (A:) Biotin 26.8 14 0.00099 13.4 2.3 19 534-552 235-253 (256) 25 d1hkha_ c.69.1.12 (A:) Gamma-l 26.5 14 0.001 13.3 2.8 19 534-552 261-279 (279) 26 d2ddha2 a.29.3.2 (A:475-655) P 25.7 5.9 0.00043 15.8 -0.3 35 181-215 104-138 (181) 27 d2gdga1 d.80.1.3 (A:1-114) Mic 25.3 14 0.001 13.2 6.3 75 136-210 19-97 (114) 28 d2hmfa2 d.58.18.10 (A:404-470) 25.0 15 0.0011 13.2 3.1 44 56-99 14-62 (67) 29 d1b6ga_ c.69.1.8 (A:) Haloalka 24.7 14 0.001 13.2 1.5 19 535-553 292-310 (310) 30 d2iboa1 d.58.48.1 (A:1-90) Hyp 24.6 15 0.0011 13.1 4.9 45 60-104 22-69 (90) 31 d2eyqa2 c.37.1.19 (A:349-465) 24.5 15 0.0011 13.1 3.3 43 39-81 26-68 (117) 32 d1mj5a_ c.69.1.8 (A:) Haloalka 24.4 15 0.0011 13.1 2.3 19 534-552 273-291 (298) 33 d1p6ta1 d.58.17.1 (A:1-72) Pot 23.2 16 0.0011 12.9 2.2 21 136-156 21-41 (72) 34 d1cpza_ d.58.17.1 (A:) Copper 21.9 17 0.0012 12.8 1.7 20 137-156 16-35 (68) 35 d1in0a2 d.58.49.1 (A:90-163) H 21.7 17 0.0012 12.7 4.5 50 49-98 7-56 (74) 36 d1jmkc_ c.69.1.22 (C:) Surfact 21.4 17 0.0012 12.7 1.3 20 534-553 210-229 (230) 37 d1r3da_ c.69.1.35 (A:) Hypothe 21.4 17 0.0012 12.7 2.5 20 534-553 243-262 (264) 38 d1qupa2 d.58.17.1 (A:2-73) Cop 20.7 18 0.0013 12.6 1.6 21 136-156 20-40 (72) 39 d1ni5a4 d.229.1.1 (A:227-314) 20.7 18 0.0013 12.6 2.4 23 531-553 17-39 (88) 40 d1osda_ d.58.17.1 (A:) Mercuri 20.1 18 0.0013 12.5 1.7 20 137-156 19-38 (72) No 1 >d2hfva1 d.58.5.5 (A:23-97) Hypothetical protein RPA1041 {Rhodopseudomonas palustris [TaxId: 1076]} Probab=94.63 E-value=0.043 Score=29.98 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=48.7 Q ss_pred CEEECCCCCHHHHHHHHHHHHHCCCCEEECCCC------------CEEEECHHHHHHHHHHHHHCCCCCC Q ss_conf 245038999899999999999779929991899------------7799518999999999997699887 Q gi|254780695|r 48 YDNLYVKLEVSDVNRISVALSEANIDFRISDNG------------SSISVPSSMVGKARIHLAAQGLPSS 105 (563) Q Consensus 48 y~~L~~~l~~~d~~~i~~~L~~~gI~y~~~~~g------------~~I~Vp~~~~~~~r~~La~~glp~~ 105 (563) |+.|+.--++--.+.+.+.|+.+||+|-+-+.+ .+|+|+++++.+||-.|+.+|++.. T Consensus 1 M~ELlrTnD~v~is~~~aLL~~agI~~~v~D~~mSilEGsig~iPRRimV~~~d~~~Ar~lL~dag~~~e 70 (75) T d2hfva1 1 LRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHE 70 (75) T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTCCEECCSCCCCSSSCCSSSSCEEEEEEGGGHHHHHHHHHHTTCCSS T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCHH T ss_conf 9331234888899999999735799779842874032144354047898757589999999998696210 No 2 >d1ic8a2 a.35.1.1 (A:87-180) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Human (Homo sapiens) [TaxId: 9606]} Probab=61.69 E-value=3.5 Score=17.26 Aligned_cols=29 Identities=10% Similarity=0.257 Sum_probs=23.7 Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHH Q ss_conf 06899999999886999899999999863 Q gi|254780695|r 524 SKQSDLRLLHMIEINEERFAKILRKWARS 552 (563) Q Consensus 524 ~~~~~~~i~~lv~e~Pe~vA~vLR~WL~e 552 (563) ..+...++++|.+++|..|+..||..|.. T Consensus 11 ~~~~~~eVE~llr~d~~~v~~~IK~Fl~~ 39 (94) T d1ic8a2 11 AAHQKAVVETLLQEDPWRVAKMVKSYLQQ 39 (94) T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 76777799999965999999999999998 No 3 >d1lxja_ d.58.48.1 (A:) Hypothetical protein YB1001C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=60.39 E-value=4 Score=16.88 Aligned_cols=49 Identities=16% Similarity=0.099 Sum_probs=38.0 Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHH----HHHHHHHCCCCCCC Q ss_conf 99999999999779929991899779951899999----99999976998877 Q gi|254780695|r 58 SDVNRISVALSEANIDFRISDNGSSISVPSSMVGK----ARIHLAAQGLPSSS 106 (563) Q Consensus 58 ~d~~~i~~~L~~~gI~y~~~~~g~~I~Vp~~~~~~----~r~~La~~glp~~~ 106 (563) .-.++++..|++.|++|++.+-|++|--+-+++.. +.-.+...|.+.-. T Consensus 24 ~yVa~~i~~i~~sGl~y~~~pmgT~IEG~~del~~~v~~~he~~~~~G~~RV~ 76 (104) T d1lxja_ 24 DFVALIEKKIRESPLKSTLHSAGTTIEGPWDDVMGLIGEIHEYGHEKGYVRVH 76 (104) T ss_dssp HHHHHHHHHHHTSSSEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEE T ss_pred HHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEE T ss_conf 99999999999759975865885367778999999999999999976998599 No 4 >d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]} Probab=58.37 E-value=4.3 Score=16.66 Aligned_cols=44 Identities=25% Similarity=0.223 Sum_probs=35.7 Q ss_pred HHHHHHHHHHHCCCCEEECC--CCCEEEECHHHHHHHHHHHHHCCC Q ss_conf 99999999997799299918--997799518999999999997699 Q gi|254780695|r 59 DVNRISVALSEANIDFRISD--NGSSISVPSSMVGKARIHLAAQGL 102 (563) Q Consensus 59 d~~~i~~~L~~~gI~y~~~~--~g~~I~Vp~~~~~~~r~~La~~gl 102 (563) =.++|.+.|.++||+--.-. +..-|+||+++..++.-.|...|. T Consensus 18 i~a~i~~~La~a~Is~~~vSty~~D~ilVp~~~~~~A~~~L~~~g~ 63 (66) T d1zhva2 18 IVLSVISPLSTNGIGIFVVSTFDGDHLLVRSNDLEKTADLLANAGH 63 (66) T ss_dssp HHHHHHHHHHTTTCCCEEEECSSCEEEEEEGGGHHHHHHHHHHTTC T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCEEEEEHHHHHHHHHHHHHCCC T ss_conf 8999999998779986998744163799878789999999998667 No 5 >d1mwwa_ d.80.1.4 (A:) Hypothetical protein HI1388.1 {Haemophilus influenzae [TaxId: 727]} Probab=55.13 E-value=4.9 Score=16.31 Aligned_cols=84 Identities=7% Similarity=0.029 Sum_probs=53.8 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH---HCCC Q ss_conf 9999999999999999960576314899998336665555555871599970687789889999999998654---0188 Q gi|254780695|r 127 QEITRVRALEGEIARTIQSISGIVAARVHIVMPDMGSFRKIGARPTASVMIRAINPSVYKSAEAIRHLVAAAV---PNLD 203 (563) Q Consensus 127 ~~~~~~ralegeL~rtI~~~~~V~~ArV~l~~p~~~~f~~~~~~~sASV~l~~~~~l~~~qv~~I~~lVa~sV---~gL~ 203 (563) ++.....++..-|..++..=+.-..-.+|-.-|++-.|..++.+.-+-|-++..++++.+|=+.+...++..+ -|.. T Consensus 14 ~k~~l~~~i~~~l~~~~g~P~~~~~~~~~~~~~~~~~~g~~rs~~~~~I~i~~~~grs~eqK~~l~~~lt~~l~~~lgi~ 93 (120) T d1mwwa_ 14 RREKLAEVIYNSLHLGLDIPKGKHAIRFLCLEKEDFYYPFDRSDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIR 93 (120) T ss_dssp HHHHHHHHHHHHHHHHHCCCTTSSCEEEEEECGGGEECCTTSCTTCEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCC T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999999999999997849442899999828645773688889879999997579999999999999999999985959 Q ss_pred CCCEEEE Q ss_conf 3526998 Q gi|254780695|r 204 MGDVTVL 210 (563) Q Consensus 204 ~e~VtVv 210 (563) +++|.|. T Consensus 94 ~~~v~I~ 100 (120) T d1mwwa_ 94 AHDVEIT 100 (120) T ss_dssp GGGEEEE T ss_pred CCEEEEE T ss_conf 0749999 No 6 >d1yqha1 d.58.48.1 (A:1-101) Hypothetical protein BC0424 {Bacillus cereus [TaxId: 1396]} Probab=51.01 E-value=5.7 Score=15.89 Aligned_cols=57 Identities=5% Similarity=0.052 Sum_probs=41.1 Q ss_pred EEECCCCC-HHHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHH----HHHHHHCCCCCC Q ss_conf 45038999-8999999999997799299918997799518999999----999997699887 Q gi|254780695|r 49 DNLYVKLE-VSDVNRISVALSEANIDFRISDNGSSISVPSSMVGKA----RIHLAAQGLPSS 105 (563) Q Consensus 49 ~~L~~~l~-~~d~~~i~~~L~~~gI~y~~~~~g~~I~Vp~~~~~~~----r~~La~~glp~~ 105 (563) .|+-.+-+ ..-..+++..|++.|++|++.+-|++|.-+-+++-.+ .-.+...|.+.- T Consensus 12 ~P~g~~~s~~~~V~~~i~~i~~sGl~y~~~pmgT~IEGe~d~v~~~v~~~~e~~~~~G~~RV 73 (101) T d1yqha1 12 VPQAKTKDVYSVVDKAIEVVQQSGVRYEVGAMETTLEGELDVLLDVVKRAQQACVDAGAEEV 73 (101) T ss_dssp EEECSSSCHHHHHHHHHHHHHHSCSEEEECSSCEEEEECHHHHHHHHHHHHHHHHHTTCSEE T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 84689996799999999999974997486699756667999999999999999997699769 No 7 >d1lxna_ d.58.48.1 (A:) Hypothetical protein MTH1187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=50.41 E-value=5.8 Score=15.82 Aligned_cols=50 Identities=20% Similarity=0.167 Sum_probs=38.5 Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCEEEEC-HHHHHH----HHHHHHHCCCCCCC Q ss_conf 899999999999779929991899779951-899999----99999976998877 Q gi|254780695|r 57 VSDVNRISVALSEANIDFRISDNGSSISVP-SSMVGK----ARIHLAAQGLPSSS 106 (563) Q Consensus 57 ~~d~~~i~~~L~~~gI~y~~~~~g~~I~Vp-~~~~~~----~r~~La~~glp~~~ 106 (563) ..-.++++..|++.|++|++.+-|++|--| =+++.. +.-.+...|.+.-. T Consensus 19 s~yVa~~i~~i~~sGl~y~~~pmgT~IEg~d~dev~~~v~~~he~~~~~G~~RV~ 73 (99) T d1lxna_ 19 SSYVAAAVEALKKLNVRYEISGMGTLLEAEDLDELMEAVKAAHEAVLQAGSDRVY 73 (99) T ss_dssp HHHHHHHHHHHTTSSCEEEEETTEEEEEESSHHHHHHHHHHHHHHHHHTTCSEEE T ss_pred HHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEE T ss_conf 9999999999997599757468803533798999999999999999977998699 No 8 >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Probab=43.04 E-value=7.5 Score=15.09 Aligned_cols=13 Identities=23% Similarity=0.156 Sum_probs=7.4 Q ss_pred HHHCCCCCCEEEE Q ss_conf 5401883526998 Q gi|254780695|r 198 AVPNLDMGDVTVL 210 (563) Q Consensus 198 sV~gL~~e~VtVv 210 (563) ..-++.+.++... T Consensus 287 ~~~~~~~~d~~~~ 299 (643) T d1pg4a_ 287 YVFDYHPGDIYWC 299 (643) T ss_dssp HHTTCCTTCEEEE T ss_pred HHHCCCCCCEEEE T ss_conf 9619898878999 No 9 >d3proc2 d.52.1.1 (C:86-163) Alpha-lytic protease prodomain {Lysobacter enzymogenes [TaxId: 69]} Probab=41.23 E-value=8 Score=14.90 Aligned_cols=73 Identities=19% Similarity=0.222 Sum_probs=47.8 Q ss_pred HHHHHHHHCCCCCEEEEE-EEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCE Q ss_conf 999999605763148999-9833666555555587159997068778988999999999865401883526998289835 Q gi|254780695|r 138 EIARTIQSISGIVAARVH-IVMPDMGSFRKIGARPTASVMIRAINPSVYKSAEAIRHLVAAAVPNLDMGDVTVLDSTGKL 216 (563) Q Consensus 138 eL~rtI~~~~~V~~ArV~-l~~p~~~~f~~~~~~~sASV~l~~~~~l~~~qv~~I~~lVa~sV~gL~~e~VtVvD~~G~~ 216 (563) +|..++..||++.+.... ..-|.+.+-.+=-..++=+|++....+-+. + =..|++. .|++...|.|+.+.|++ T Consensus 5 ~l~~~~~~Lda~~~~ld~~~~~~p~~V~~WYVDv~tNsVVV~a~~g~~a-a---a~~fi~a--AGvd~~~VRV~~S~~k~ 78 (78) T d3proc2 5 QLQSAMEQLDAGANARVKGVSKPLDGVQSWYVDPRSNAVVVKVDDGATD-A---GVDFVAL--SGADSAQVRIESSPGKL 78 (78) T ss_dssp HHHHHHHHHHHHHHC--------CTTEEEEEEEGGGTEEEEEEETTCHH-H---HHHHHHH--HTCCTTTEEEEEESSBC T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCHH-H---HHHHHHH--HCCCCCCEEEEECCCCC T ss_conf 8888899999999877766425887860477506888599995688538-8---9999998--58996657987378879 No 10 >d1vk8a_ d.58.48.1 (A:) Hypothetical protein TM0486 {Thermotoga maritima [TaxId: 2336]} Probab=40.94 E-value=8 Score=14.87 Aligned_cols=47 Identities=6% Similarity=0.038 Sum_probs=34.2 Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHHHHH---HHHCCCCC Q ss_conf 999999999997799299918997799518999999999---99769988 Q gi|254780695|r 58 SDVNRISVALSEANIDFRISDNGSSISVPSSMVGKARIH---LAAQGLPS 104 (563) Q Consensus 58 ~d~~~i~~~L~~~gI~y~~~~~g~~I~Vp~~~~~~~r~~---La~~glp~ 104 (563) .-..+++..|++.|++|++.+-|++|.-+-+++-.+--. +...|-+. T Consensus 20 ~~V~~~i~~i~~sGl~y~v~pmgT~iEG~~dev~~~v~~~~e~~~~g~~R 69 (93) T d1vk8a_ 20 EVIDRAIEKISSWGMKYEVGPSNTTVEGEFEEIMDRVKELARYLEQFAKR 69 (93) T ss_dssp HHHHHHHHHHHTTCSCEEECSSCEEEEECHHHHHHHHHHHHHHHTTTCSE T ss_pred HHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCE T ss_conf 99999999999749964866885377378999999999999999869987 No 11 >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Probab=39.47 E-value=8.5 Score=14.73 Aligned_cols=19 Identities=16% Similarity=0.351 Sum_probs=16.6 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) |.+++|+.+|..|+.||.. T Consensus 263 ml~e~~~~vA~~i~~~L~~ 281 (283) T d2h7xa1 263 MMRDHAPAVAEAVLSWLDA 281 (283) T ss_dssp HHHTTHHHHHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHHHH T ss_conf 0338899999999999985 No 12 >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Probab=38.69 E-value=7.9 Score=14.92 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=18.2 Q ss_pred HHHHCHHHHHHHHHHHHHHHHH Q ss_conf 9886999899999999863786 Q gi|254780695|r 534 MIEINEERFAKILRKWARSEIE 555 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~ee~~ 555 (563) +-.|+|++++++|++||..+.. T Consensus 300 ~~~e~p~~v~~~i~~FL~~~~~ 321 (322) T d1zd3a2 300 TQMDKPTEVNQILIKWLDSDAR 321 (322) T ss_dssp HHHHSHHHHHHHHHHHHHHHTC T ss_pred HHHHCHHHHHHHHHHHHHHCCC T ss_conf 5896999999999999865378 No 13 >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Probab=38.66 E-value=8.7 Score=14.64 Aligned_cols=19 Identities=11% Similarity=0.267 Sum_probs=16.4 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +-.++|++++++|+.||++ T Consensus 252 ~~~e~p~~~~~~i~~Fl~e 270 (271) T d1uk8a_ 252 TQIEQTDRFNRLVVEFFNE 270 (271) T ss_dssp HHHHTHHHHHHHHHHHHHT T ss_pred HHHHCHHHHHHHHHHHHHC T ss_conf 5897999999999999952 No 14 >d1s0ya_ d.80.1.1 (A:) Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 {Pseudomonas pavonaceae [TaxId: 47881]} Probab=38.52 E-value=8.7 Score=14.63 Aligned_cols=36 Identities=3% Similarity=-0.043 Sum_probs=19.5 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHH---HCCCCCCEEEE Q ss_conf 9970687789889999999998654---01883526998 Q gi|254780695|r 175 VMIRAINPSVYKSAEAIRHLVAAAV---PNLDMGDVTVL 210 (563) Q Consensus 175 V~l~~~~~l~~~qv~~I~~lVa~sV---~gL~~e~VtVv 210 (563) |.+++.+|+|.+|-+.+...+..++ -|..+++|.|+ T Consensus 3 I~v~~~~Grt~eqK~~l~~~it~~~~~~~g~~~e~v~V~ 41 (62) T d1s0ya_ 3 ISCDMRYGRTDEQKRALSAGLLRVISEATGEPRENIFFV 41 (62) T ss_dssp EEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEE T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE T ss_conf 999980899999999999999999999829490529999 No 15 >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Probab=38.13 E-value=8.9 Score=14.59 Aligned_cols=19 Identities=11% Similarity=0.242 Sum_probs=16.4 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +-.++|+++++.|+.||++ T Consensus 264 ~~~e~p~~~~~~i~~FLk~ 282 (283) T d2rhwa1 264 AQWEHADEFNRLVIDFLRH 282 (283) T ss_dssp HHHHTHHHHHHHHHHHHHH T ss_pred HHHHCHHHHHHHHHHHHHC T ss_conf 4896999999999999857 No 16 >d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]} Probab=37.54 E-value=9.1 Score=14.53 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=21.3 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHH---HHCCCCCCEEEE Q ss_conf 997068778988999999999865---401883526998 Q gi|254780695|r 175 VMIRAINPSVYKSAEAIRHLVAAA---VPNLDMGDVTVL 210 (563) Q Consensus 175 V~l~~~~~l~~~qv~~I~~lVa~s---V~gL~~e~VtVv 210 (563) |.+++.+|+|.+|-+.+..-+..+ +-|..+++|.|+ T Consensus 3 I~i~~~~Grs~eqK~~l~~~it~~~~~~~g~~~~~v~V~ 41 (59) T d1otfa_ 3 AQLYIIEGRTDEQKETLIRQVSEAMANSLDAPLERVRVL 41 (59) T ss_dssp EEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEE T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE T ss_conf 999981899999999999999999999849590429999 No 17 >d1zvpa2 d.58.18.9 (A:68-131) Hypothetical protein VC0802 {Vibrio cholerae [TaxId: 666]} Probab=30.32 E-value=12 Score=13.77 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=30.8 Q ss_pred HHHHHHHHHHCCCCEEECC--CCCEEEECHHHHHHHHHHHHH Q ss_conf 9999999997799299918--997799518999999999997 Q gi|254780695|r 60 VNRISVALSEANIDFRISD--NGSSISVPSSMVGKARIHLAA 99 (563) Q Consensus 60 ~~~i~~~L~~~gI~y~~~~--~g~~I~Vp~~~~~~~r~~La~ 99 (563) .+.|...|.++||+--.-. +..-|+||+++..+|--.|.. T Consensus 20 ~A~is~~La~~~Is~nvis~~~hDhifVp~~~~~~Al~~L~~ 61 (64) T d1zvpa2 20 TAAFATKLAEHGISANVIAGYYHDHIFVQKEKAQQALQALGE 61 (64) T ss_dssp HHHHHHHHHHTTCCCEEEECSSCEEEEEEGGGHHHHHHHHTT T ss_pred HHHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHHHHHHHH T ss_conf 999999999779973787721153698735569999999999 No 18 >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Probab=29.49 E-value=12 Score=13.68 Aligned_cols=19 Identities=16% Similarity=0.366 Sum_probs=16.1 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +-.++|+++++.|+.||+. T Consensus 271 ~~~e~p~~v~~~i~~fL~~ 289 (291) T d1bn7a_ 271 LQEDNPDLIGSEIARWLPG 289 (291) T ss_dssp GGGTCHHHHHHHHHHHSGG T ss_pred HHHHCHHHHHHHHHHHHHH T ss_conf 1785999999999999996 No 19 >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Probab=28.71 E-value=7.7 Score=14.98 Aligned_cols=18 Identities=17% Similarity=0.514 Sum_probs=15.8 Q ss_pred HHHHCHHHHHHHHHHHHH Q ss_conf 988699989999999986 Q gi|254780695|r 534 MIEINEERFAKILRKWAR 551 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~ 551 (563) |.+++|+.+|.+|+.||. T Consensus 237 ml~~~~~~~A~~i~~~L~ 254 (255) T d1mo2a_ 237 MVQEHADAIARHIDAWLG 254 (255) T ss_dssp CSSCCHHHHHHHHHHHHT T ss_pred CCCCCHHHHHHHHHHHHC T ss_conf 030369999999999868 No 20 >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Probab=27.66 E-value=13 Score=13.47 Aligned_cols=19 Identities=11% Similarity=0.148 Sum_probs=16.1 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +..++|+++++.|+.||++ T Consensus 259 ~~~e~p~~~~~~i~~fL~k 277 (277) T d1brta_ 259 LLWTHAEEVNTALLAFLAK 277 (277) T ss_dssp HHHHTHHHHHHHHHHHHHC T ss_pred HHHHCHHHHHHHHHHHHCC T ss_conf 3886999999999999782 No 21 >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Probab=27.59 E-value=13 Score=13.58 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=25.9 Q ss_pred HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC-CCHHHH-HHHHH Q ss_conf 9999999605763148999983366655555558715999706877-898899-99999 Q gi|254780695|r 137 GEIARTIQSISGIVAARVHIVMPDMGSFRKIGARPTASVMIRAINP-SVYKSA-EAIRH 193 (563) Q Consensus 137 geL~rtI~~~~~V~~ArV~l~~p~~~~f~~~~~~~sASV~l~~~~~-l~~~qv-~~I~~ 193 (563) .-+++.|..++||++++|++ ++-.|.++..++ .+.+++ +.|.. T Consensus 19 ~~Ie~~l~~~~GV~~v~v~~--------------~~~~v~v~~d~~~~~~~~i~~~i~~ 63 (72) T d2aw0a_ 19 QSIEGVISKKPGVKSIRVSL--------------ANSNGTVEYDPLLTSPETLRGAIED 63 (72) T ss_dssp HHHHHHHHTSTTCCCEEEET--------------TTTEEEEEECTTTCCHHHHHHHHHH T ss_pred HHHHHHHHCCCCCEEEEEEC--------------CCCEEEEEECCCCCCHHHHHHHHHH T ss_conf 99999872689967999988--------------8999999989999999999999995 No 22 >d1uiza_ d.80.1.3 (A:) Microphage migration inhibition factor (MIF) {African clawed frog (Xenopus laevis) [TaxId: 8355]} Probab=27.12 E-value=13 Score=13.41 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=44.9 Q ss_pred HHHHHHHHHHHHCCCCCEEEEEEEE-CCCCCCCCCCCCCCEEEEEECCCCCCHHH----HHHHHHHHHHHHHCCCCCCEE Q ss_conf 9999999999605763148999983-36665555555871599970687789889----999999998654018835269 Q gi|254780695|r 134 ALEGEIARTIQSISGIVAARVHIVM-PDMGSFRKIGARPTASVMIRAINPSVYKS----AEAIRHLVAAAVPNLDMGDVT 208 (563) Q Consensus 134 alegeL~rtI~~~~~V~~ArV~l~~-p~~~~f~~~~~~~sASV~l~~~~~l~~~q----v~~I~~lVa~sV~gL~~e~Vt 208 (563) ++..+|.+.|..+-|--...|...+ +....+......|.|-|-|+.-+++++++ ...|..++..-. |+.+++|- T Consensus 18 ~~~~~ls~~ia~~lgKpe~~vmv~v~~~~~m~fggs~~P~a~~~v~siG~l~~~~n~~~s~~i~~~l~~~L-gI~~~Riy 96 (115) T d1uiza_ 18 TLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQL-NIPANRVY 96 (115) T ss_dssp THHHHHHHHHHHHHTCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHH-CCCGGGEE T ss_pred HHHHHHHHHHHHHHCCCHHHEEEEECCCCEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHC-CCCCCEEE T ss_conf 99999999999987999799999983896079679899689999999768881355999999999999874-99956499 Q ss_pred EE Q ss_conf 98 Q gi|254780695|r 209 VL 210 (563) Q Consensus 209 Vv 210 (563) |. T Consensus 97 i~ 98 (115) T d1uiza_ 97 IN 98 (115) T ss_dssp EE T ss_pred EE T ss_conf 99 No 23 >d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=26.85 E-value=5.5 Score=15.99 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=38.6 Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCE---EEC--CCCCCCCCHHHHHHH Q ss_conf 778988999999999865401883526998289835---003--676533324799999 Q gi|254780695|r 181 NPSVYKSAEAIRHLVAAAVPNLDMGDVTVLDSTGKL---LTA--NEMERNILGKSLSIV 234 (563) Q Consensus 181 ~~l~~~qv~~I~~lVa~sV~gL~~e~VtVvD~~G~~---L~~--~~~~~~~~~~~~~~~ 234 (563) +-++++|+..|...+-.-...|.|+-|.+||..|-. |++ +..++.......+.. T Consensus 114 ~~ls~~q~~~l~~~i~~L~~~Lrp~Av~LVDAF~~pD~~L~SaLG~~DG~vYe~l~~~a 172 (198) T d1w07a2 114 NCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEA 172 (198) T ss_dssp TSSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCCHHHHTCSTTCTTCCCHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCHHHHHHHHHH T ss_conf 98789999999999999999998889888653599878766374067878999999999 No 24 >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Probab=26.78 E-value=14 Score=13.37 Aligned_cols=19 Identities=11% Similarity=0.141 Sum_probs=16.1 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +--|+|++++++|+.||++ T Consensus 235 ~~~e~p~~~~~~l~~fl~~ 253 (256) T d1m33a_ 235 PFISHPAEFCHLLVALKQR 253 (256) T ss_dssp HHHHSHHHHHHHHHHHHTT T ss_pred HHHHCHHHHHHHHHHHHHH T ss_conf 3897999999999999997 No 25 >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Probab=26.51 E-value=14 Score=13.34 Aligned_cols=19 Identities=5% Similarity=0.218 Sum_probs=16.2 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +..++|+++++.|+.||++ T Consensus 261 ~~~e~p~~v~~~i~~fl~k 279 (279) T d1hkha_ 261 LLWTHADEVNAALKTFLAK 279 (279) T ss_dssp HHHHTHHHHHHHHHHHHHC T ss_pred HHHHCHHHHHHHHHHHHCC T ss_conf 4886999999999999784 No 26 >d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=25.70 E-value=5.9 Score=15.77 Aligned_cols=35 Identities=6% Similarity=-0.004 Sum_probs=31.3 Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC Q ss_conf 77898899999999986540188352699828983 Q gi|254780695|r 181 NPSVYKSAEAIRHLVAAAVPNLDMGDVTVLDSTGK 215 (563) Q Consensus 181 ~~l~~~qv~~I~~lVa~sV~gL~~e~VtVvD~~G~ 215 (563) +-++++|+..|...+-.-...|.|+-|.+||..|- T Consensus 104 g~ls~~q~~~i~~~i~~L~~~lrp~Av~LVDaF~~ 138 (181) T d2ddha2 104 SIITGAQLSQVNARILELLTLIRPNAVALVDAFDF 138 (181) T ss_dssp TSSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCC T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99899999999999999999999999988670379 No 27 >d2gdga1 d.80.1.3 (A:1-114) Microphage migration inhibition factor (MIF) {Mouse (Mus musculus) [TaxId: 10090]} Probab=25.30 E-value=14 Score=13.19 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=39.8 Q ss_pred HHHHHHHHHHCCCCCEEEEEEEE-CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH---CCCCCCEEEE Q ss_conf 99999999605763148999983-366655555558715999706877898899999999986540---1883526998 Q gi|254780695|r 136 EGEIARTIQSISGIVAARVHIVM-PDMGSFRKIGARPTASVMIRAINPSVYKSAEAIRHLVAAAVP---NLDMGDVTVL 210 (563) Q Consensus 136 egeL~rtI~~~~~V~~ArV~l~~-p~~~~f~~~~~~~sASV~l~~~~~l~~~qv~~I~~lVa~sV~---gL~~e~VtVv 210 (563) ..+|.+.|..+-|=-...|...+ |....+......|.|-|-|+.-+++++++-+.+...+...+. |+.+++|-|. T Consensus 19 ~~~~s~~ia~~lgKpe~~vmV~v~~~~~m~fgGs~~P~a~~~l~siG~~~~~~n~~~s~~i~~~l~~~LgI~~~RiyI~ 97 (114) T d2gdga1 19 LSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYIN 97 (114) T ss_dssp HHHHHHHHHHHHCCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE T ss_pred HHHHHHHHHHHHCCCHHHEEEEEECCCCEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf 9999999998879997998999967987277688997799999980689978889999999999999839795659999 No 28 >d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} Probab=25.02 E-value=15 Score=13.16 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=33.4 Q ss_pred CHHHHHHHHHHHHHCCCCEEECCCCC-----EEEECHHHHHHHHHHHHH Q ss_conf 98999999999997799299918997-----799518999999999997 Q gi|254780695|r 56 EVSDVNRISVALSEANIDFRISDNGS-----SISVPSSMVGKARIHLAA 99 (563) Q Consensus 56 ~~~d~~~i~~~L~~~gI~y~~~~~g~-----~I~Vp~~~~~~~r~~La~ 99 (563) .+.=++.+.+.|.++||.-++-..|. ++.|+++|.+++.-.|-. T Consensus 14 ~~gi~arif~~L~~~~InV~mIsq~~Se~~Is~~V~~~d~~~Av~~Lh~ 62 (67) T d2hmfa2 14 AKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHE 62 (67) T ss_dssp CTTHHHHHHHHHHHTTCCCCEEEESSCSSEEEEEEEGGGHHHHHHHHHH T ss_pred CCCHHHHHHHHHHHCCCCHHHEEECCCCCEEEEEEEHHHHHHHHHHHHH T ss_conf 8239999999999869986774534860249999808999999999999 No 29 >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Probab=24.70 E-value=14 Score=13.23 Aligned_cols=19 Identities=26% Similarity=0.399 Sum_probs=15.9 Q ss_pred HHHCHHHHHHHHHHHHHHH Q ss_conf 8869998999999998637 Q gi|254780695|r 535 IEINEERFAKILRKWARSE 553 (563) Q Consensus 535 v~e~Pe~vA~vLR~WL~ee 553 (563) -.++|+.++++|+.||..| T Consensus 292 ~~e~pe~v~~~i~~Fl~~~ 310 (310) T d1b6ga_ 292 QEFGEQVAREALKHFAETE 310 (310) T ss_dssp GGGHHHHHHHHHHHHHHTC T ss_pred HHHCHHHHHHHHHHHHHCC T ss_conf 1408999999999998079 No 30 >d2iboa1 d.58.48.1 (A:1-90) Hypothetical protein SP2199 {Streptococcus pneumoniae [TaxId: 1313]} Probab=24.64 E-value=15 Score=13.11 Aligned_cols=45 Identities=7% Similarity=0.082 Sum_probs=31.9 Q ss_pred HHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHHHH---HHHHCCCCC Q ss_conf 999999999779929991899779951899999999---999769988 Q gi|254780695|r 60 VNRISVALSEANIDFRISDNGSSISVPSSMVGKARI---HLAAQGLPS 104 (563) Q Consensus 60 ~~~i~~~L~~~gI~y~~~~~g~~I~Vp~~~~~~~r~---~La~~glp~ 104 (563) ..+++..|++.|++|++.+-|++|.=+-+++-.+-- ....+|.+. T Consensus 22 V~~~I~~i~~sgl~~~~~pm~T~ieGe~~~vm~~i~~~~e~~~~g~~r 69 (90) T d2iboa1 22 IDQVIAYLQTQEVTMVVTPFETVLEGEFDELMRILKEALEVAGQEADN 69 (90) T ss_dssp HHHHHHHHHHSSSEEEECSSCEEEEEEHHHHHHHHHHHHHHHHTSCSC T ss_pred HHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCE T ss_conf 999999999749968976886478879999999999999999758986 No 31 >d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]} Probab=24.48 E-value=15 Score=13.09 Aligned_cols=43 Identities=9% Similarity=-0.033 Sum_probs=33.7 Q ss_pred HHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCC Q ss_conf 9998469982450389998999999999997799299918997 Q gi|254780695|r 39 ARFFVNSPHYDNLYVKLEVSDVNRISVALSEANIDFRISDNGS 81 (563) Q Consensus 39 ~~~~~~~p~y~~L~~~l~~~d~~~i~~~L~~~gI~y~~~~~g~ 81 (563) +--|.....|.+|+.+-+..-+..+.+.|.+.||++...++.. T Consensus 26 L~~~i~~~~~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~~~ 68 (117) T d2eyqa2 26 LRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLD 68 (117) T ss_dssp HHHHHTTCCSCCCEEESSHHHHHHHHHHHGGGTCCCEECSSGG T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEECCHH T ss_conf 9999995898399997996579999999997699825706755 No 32 >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Probab=24.42 E-value=15 Score=13.09 Aligned_cols=19 Identities=11% Similarity=0.251 Sum_probs=16.3 Q ss_pred HHHHCHHHHHHHHHHHHHH Q ss_conf 9886999899999999863 Q gi|254780695|r 534 MIEINEERFAKILRKWARS 552 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~e 552 (563) +..|+|+++++.|+.||+. T Consensus 273 ~~~e~P~~v~~~i~~fl~~ 291 (298) T d1mj5a_ 273 IQEDSPDEIGAAIAAFVRR 291 (298) T ss_dssp GGGTCHHHHHHHHHHHHHH T ss_pred HHHHCHHHHHHHHHHHHHH T ss_conf 1896999999999999961 No 33 >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Probab=23.16 E-value=16 Score=12.93 Aligned_cols=21 Identities=19% Similarity=0.525 Sum_probs=16.9 Q ss_pred HHHHHHHHHHCCCCCEEEEEE Q ss_conf 999999996057631489999 Q gi|254780695|r 136 EGEIARTIQSISGIVAARVHI 156 (563) Q Consensus 136 egeL~rtI~~~~~V~~ArV~l 156 (563) ..-+++.++.++||.+++|++ T Consensus 21 ~~~Ie~~l~~~~gV~~v~v~~ 41 (72) T d1p6ta1 21 AARIEKGLKRMPGVTDANVNL 41 (72) T ss_dssp HHHHHHHHTTSSSEEEEEEEG T ss_pred HHHHHHHHHCCCCCEEEEEEC T ss_conf 999999997499957999986 No 34 >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Probab=21.86 E-value=17 Score=12.76 Aligned_cols=20 Identities=25% Similarity=0.531 Sum_probs=15.0 Q ss_pred HHHHHHHHHCCCCCEEEEEE Q ss_conf 99999996057631489999 Q gi|254780695|r 137 GEIARTIQSISGIVAARVHI 156 (563) Q Consensus 137 geL~rtI~~~~~V~~ArV~l 156 (563) .-+++.|..++||++++|.+ T Consensus 16 ~~Ie~~l~~~~GV~~v~V~~ 35 (68) T d1cpza_ 16 ARIEEAVGRISGVKKVKVQL 35 (68) T ss_dssp HHHHHHHHTSTTEEEEEEET T ss_pred HHHHHHHHCCCCCEEEEEEC T ss_conf 99999975699937999987 No 35 >d1in0a2 d.58.49.1 (A:90-163) Hypothetical protein HI1034 {Haemophilus influenzae [TaxId: 727]} Probab=21.65 E-value=17 Score=12.73 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=40.4 Q ss_pred EEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHHHHHHH Q ss_conf 45038999899999999999779929991899779951899999999999 Q gi|254780695|r 49 DNLYVKLEVSDVNRISVALSEANIDFRISDNGSSISVPSSMVGKARIHLA 98 (563) Q Consensus 49 ~~L~~~l~~~d~~~i~~~L~~~gI~y~~~~~g~~I~Vp~~~~~~~r~~La 98 (563) ..|-.|++.+.|..|+..+.+.++..+.+=.|..|.|-..+.+.+...++ T Consensus 7 i~l~~GI~~e~AKkI~k~IK~~k~KVq~~IQGd~vRVtgKkrDdLQ~vi~ 56 (74) T d1in0a2 7 IKLKQGIETEMAKKITKLVKDSKIKVQTQIQGEQVRVTGKSRDDLQAVIQ 56 (74) T ss_dssp EEECCSCCHHHHHHHHHHHHHHTCSEEEEEETTEEEEEESCHHHHHHHHH T ss_pred EEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHH T ss_conf 77212759899999999997238841599758277863788799999999 No 36 >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Probab=21.43 E-value=17 Score=12.72 Aligned_cols=20 Identities=20% Similarity=0.229 Sum_probs=15.4 Q ss_pred HHHHCHHHHHHHHHHHHHHH Q ss_conf 98869998999999998637 Q gi|254780695|r 534 MIEINEERFAKILRKWARSE 553 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~ee 553 (563) |-+++++++|++|+.||+.+ T Consensus 210 l~~~~~~~va~~I~~~L~~~ 229 (230) T d1jmkc_ 210 LQGETLDRNAGILLEFLNTQ 229 (230) T ss_dssp TSHHHHHHHHHHHHHHHTCB T ss_pred CCCCCHHHHHHHHHHHHHHC T ss_conf 48752999999999998333 No 37 >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Probab=21.37 E-value=17 Score=12.70 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=16.6 Q ss_pred HHHHCHHHHHHHHHHHHHHH Q ss_conf 98869998999999998637 Q gi|254780695|r 534 MIEINEERFAKILRKWARSE 553 (563) Q Consensus 534 lv~e~Pe~vA~vLR~WL~ee 553 (563) +--|+|+++++.|+.||++= T Consensus 243 ~~~e~P~~~~~~i~~fl~~l 262 (264) T d1r3da_ 243 VHHEQPQAFAKIVQAMIHSI 262 (264) T ss_dssp HHHHCHHHHHHHHHHHHHHH T ss_pred HHHHCHHHHHHHHHHHHHHC T ss_conf 48979999999999999863 No 38 >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=20.75 E-value=18 Score=12.61 Aligned_cols=21 Identities=19% Similarity=0.406 Sum_probs=15.6 Q ss_pred HHHHHHHHHHCCCCCEEEEEE Q ss_conf 999999996057631489999 Q gi|254780695|r 136 EGEIARTIQSISGIVAARVHI 156 (563) Q Consensus 136 egeL~rtI~~~~~V~~ArV~l 156 (563) ..-+++.|..++||+++.|++ T Consensus 20 ~~~Iek~l~~~~gV~~v~vdl 40 (72) T d1qupa2 20 VNDIKACLKNVPGINSLNFDI 40 (72) T ss_dssp HHHHHHHHTTCTTEEEEEEET T ss_pred HHHHHHHHHCCCCEEEEEEEC T ss_conf 999999986699804999988 No 39 >d1ni5a4 d.229.1.1 (A:227-314) tRNA-Ile-lysidine synthetase, TilS, substrate-binding domain {Escherichia coli [TaxId: 562]} Probab=20.70 E-value=18 Score=12.60 Aligned_cols=23 Identities=26% Similarity=0.709 Sum_probs=15.3 Q ss_pred HHHHHHHCHHHHHHHHHHHHHHH Q ss_conf 99998869998999999998637 Q gi|254780695|r 531 LLHMIEINEERFAKILRKWARSE 553 (563) Q Consensus 531 i~~lv~e~Pe~vA~vLR~WL~ee 553 (563) +..+..=.+.+.++|||-||... T Consensus 17 i~~l~~Ls~~R~~nlLR~WL~~~ 39 (88) T d1ni5a4 17 IVPMLAMSDARRAAIIRRWLAGQ 39 (88) T ss_dssp SGGGTTSCHHHHHHHHHHHHHHT T ss_pred HHHHHHCCHHHHHHHHHHHHHHC T ss_conf 89998299999999999999986 No 40 >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Probab=20.08 E-value=18 Score=12.52 Aligned_cols=20 Identities=15% Similarity=0.355 Sum_probs=15.2 Q ss_pred HHHHHHHHHCCCCCEEEEEE Q ss_conf 99999996057631489999 Q gi|254780695|r 137 GEIARTIQSISGIVAARVHI 156 (563) Q Consensus 137 geL~rtI~~~~~V~~ArV~l 156 (563) .-+++.+..++||.+++|++ T Consensus 19 ~~Ie~~l~~~~gV~~v~v~~ 38 (72) T d1osda_ 19 ITVKKAISKVEGVSKVDVTF 38 (72) T ss_dssp HHHHHHHHTSTTEEEEEEET T ss_pred HHHHHHHHCCCCCEEEEEEC T ss_conf 99999997499967999986 Done!