PSIBLAST alignment of GI: 254780695 and protein with PDB id: 1yj7
>gi|71042041|pdb|1YJ7|A Chain A, Crystal Structure Of Enteropathogenic E.Coli (Epec) Type Iii Secretion System Protein Escj Length = 171
>gi|71042042|pdb|1YJ7|B Chain B, Crystal Structure Of Enteropathogenic E.Coli (Epec) Type Iii Secretion System Protein Escj Length = 171
Score = 89.6 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 51 LYVKLEVSDVNRISVALSEA--NIDFRISDNGS-SISVPSSMVGKARIHLAAQGLPSSSS 107
LY L + N++ L N+ + +G+ ++SV ++ +A L G P
Sbjct: 5 LYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVAAADFVRAITILNNNGFPKKKF 64
Query: 108 NSGYELFDKVNSFGLTSFMQEITRVRALEGEIARTIQSISGIVAARVHIVMPDMGSFRKI 167
+ E+ + + + E +I R + I G++ V + + +
Sbjct: 65 -ADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNVNNN-----E 118
Query: 168 GARPTASVMIRAINPSVY-KSAEAIRHLVAAAVPNLDMGDVTVL 210
+A+V++ + S I++LV +V +L + +++V+
Sbjct: 119 SQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISVV 162