PSIBLAST alignment of GI: 254780695 and protein with PDB id: 1yj7

>gi|71042041|pdb|1YJ7|A Chain A, Crystal Structure Of Enteropathogenic E.Coli (Epec) Type Iii Secretion System Protein Escj Length = 171
>gi|71042042|pdb|1YJ7|B Chain B, Crystal Structure Of Enteropathogenic E.Coli (Epec) Type Iii Secretion System Protein Escj Length = 171
 Score = 89.6 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 51  LYVKLEVSDVNRISVALSEA--NIDFRISDNGS-SISVPSSMVGKARIHLAAQGLPSSSS 107
           LY  L   + N++   L     N+   +  +G+ ++SV ++   +A   L   G P    
Sbjct: 5   LYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVAAADFVRAITILNNNGFPKKKF 64

Query: 108 NSGYELFDKVNSFGLTSFMQEITRVRALEGEIARTIQSISGIVAARVHIVMPDMGSFRKI 167
            +  E+    +    +   +        E +I R +  I G++   V + + +       
Sbjct: 65  -ADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNVNNN-----E 118

Query: 168 GARPTASVMIRAINPSVY-KSAEAIRHLVAAAVPNLDMGDVTVL 210
               +A+V++ +        S   I++LV  +V +L + +++V+
Sbjct: 119 SQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISVV 162