RPSBLAST alignment for GI: 254780695 and conserved domain: TIGR02544

>gnl|CDD|162912 TIGR02544, III_secr_YscJ, type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF. Length = 193
 Score = 82.3 bits (204), Expect = 3e-16
 Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 11/169 (6%)

Query: 49  DNLYVKLEVSDVNRISVALSEANID---FRISDNGSSISVPSSMVGKARIHLAAQGLPSS 105
           D LY  L   + N +   L    ID         G +ISV  S   +A   L   GLP  
Sbjct: 20  DLLYSGLSEREANEMLAVLMRHGIDAEKEGSGKGGYTISVEESDFARAVELLRQYGLPRQ 79

Query: 106 SSNSGYELFDKVNSFGLTSFMQEITR-VRALEGEIARTIQSISGIVAARVHIVMPDMGSF 164
              +  ELF K +   ++S  +E  R + A+E  + +T+  I G+++ARVH+V+P+  + 
Sbjct: 80  RFVNLGELFPK-DGL-VSSPQEERARYLYAIEQRLEQTLSQIDGVISARVHVVLPENDNN 137

Query: 165 RKIGARPTASVMIR---AINPSVYKSAEAIRHLVAAAVPNLDMGDVTVL 210
            +     +ASV I+    +N         I+ LVA ++P LD  +V+V+
Sbjct: 138 GRPKKPSSASVFIKYRPGLNLDALIP--KIKRLVANSIPGLDYDNVSVV 184