RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780695|ref|YP_003065108.1| flagellar MS-ring protein [Candidatus Liberibacter asiaticus str. psy62] (563 letters) >d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 148 Score = 27.0 bits (60), Expect = 4.1 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 9/69 (13%) Query: 311 NMPHVSDRKVPLPRSLENTDKK--------EEQSNYEINTKSIATTH-DNYKLERLSIAV 361 + P + + LP + NT KK ++ Y N + H D L+R+ +A Sbjct: 50 SRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMAC 109 Query: 362 VVNKGRLTE 370 + G + Sbjct: 110 GLESGSCSA 118 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.131 0.353 Gapped Lambda K H 0.267 0.0653 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,894,725 Number of extensions: 85534 Number of successful extensions: 216 Number of sequences better than 10.0: 1 Number of HSP's gapped: 216 Number of HSP's successfully gapped: 5 Length of query: 563 Length of database: 2,407,596 Length adjustment: 90 Effective length of query: 473 Effective length of database: 1,171,896 Effective search space: 554306808 Effective search space used: 554306808 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 55 (25.1 bits)