HHsearch alignment for GI: 254780696 and conserved domain: COG0189

>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=473.98  Aligned_cols=302  Identities=36%  Similarity=0.583  Sum_probs=280.8

Q ss_pred             CEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCC-HHHC
Q ss_conf             318997099888484764679999999988988999954124899989999999999807774126504644352-1006
Q gi|254780696|r    5 RNIAIQMNHISTVKVKEDSTFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIID-LSQM   83 (316)
Q Consensus         5 ~kI~fimDpi~~i~~~~DTT~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~-L~~f   83 (316)
T Consensus         1 mk~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (318)
T COG0189           1 MKLAILMDPIES-DIYKDTTFALMEAAQKRGHELAILDDGDLSLRKGEIKALARLVEVGEVIGLHYELIEEEDLSLLDEL   79 (318)
T ss_pred             CCCCCCCCCCCC-CCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC
T ss_conf             963101263214-7655439999887786073489971653114513368888665322100101243331002220367


Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCC-CCEEECCHHHHHHCCCHHHHHHHHHH----CCCCEEECCHHHHHHHHHHH--
Q ss_conf             366883288622479999999986235-85041174887525650343345430----44310003724556888852--
Q gi|254780696|r   84 DVILIRQDPPFNMHYITSTYLLEKINP-ETLIVNNPFWIRNSPEKIFVTEFSEL----MPPTLISRDITQITRFYLEM--  156 (316)
Q Consensus        84 D~i~iR~dPp~d~~yi~~~~~Le~~~~-~~~viN~p~~i~~~~eKl~~~~~~~~----~P~T~vt~~~~~~~~f~~~~--  156 (316)
T Consensus        80 D~i~~R~~~~~~~----~~~~~~~~E~~G~~viN~p~~i~~~~nK~~~~~~l~~~~ipvP~T~i~~~~~~~~~~~~~~~g  155 (318)
T COG0189          80 DVIIMRKDPPFDF----ATRFLRLAERKGVPVINDPQSIRRCRNKLYTTQLLAKAGIPVPPTLITRDPDEAAEFVAEHLG  155 (318)
T ss_pred             CEEEECCCCHHHH----HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCC
T ss_conf             2899737860456----899999998749868788799876355799999999659999986896584788999997468


Q ss_pred             HHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCEEEE--EEEEECCCCCCC
Q ss_conf             143311168854344687448871158899999840013340021053445682699998998863--212204568600
Q gi|254780696|r  157 KDIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLFEKYPEPLMIQSYLPQIRDGDKRILLLNGKPVG--AVNRIPSEVDNR  234 (316)
Q Consensus       157 ~~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~~~~~~~ii~Qefi~~~~~gD~Rv~vi~g~~v~--a~~R~~~~~~~r  234 (316)
T Consensus       156 ~pvVlKp~~Gs~G~gV~~v~~~d~~l~~~~e~~~~~~~~~~ivQeyi~~~~~~~rrivv~~~~~~~~y~~~R~~~~~~~R  235 (318)
T COG0189         156 FPVVLKPLDGSGGRGVFLVEDADPELLSLLETLTQEGRKLIIVQEYIPKAKRDDRRVLVGGGEVVAIYALARIPASGDFR  235 (318)
T ss_pred             CCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCE
T ss_conf             98899647888866559943776569999998634556429862034767787399999899998987120047777520


Q ss_pred             CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEE----CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             000014731110077899999999999999849879999511----7878898368830378899751999899999999
Q gi|254780696|r  235 SNIHAGGKAELTKLTKIDLDICKRIGESLRERGLFFTGIDVI----GDYITEINVTSPTCIREIHRNGGENVASLFWDGI  310 (316)
Q Consensus       235 ~Nl~~Gg~~~~~~lt~~~~~i~~~~~~~L~~~gl~~~GiDii----g~~i~EvNvtsP~g~~~~~~~~~~~i~~~i~d~i  310 (316)
T Consensus       236 ~N~a~Gg~~e~~~l~~e~~elA~kaa~~l---Gl~~~GVDiie~~~g~~V~EVN~-sP~~~~~i~~~~g~~~~~~~~~~i  311 (318)
T COG0189         236 SNLARGGRAEPCELTEEEEELAVKAAPAL---GLGLVGVDIIEDKDGLYVTEVNV-SPTGKGEIERVTGVNIAGLIIDAI  311 (318)
T ss_pred             EECCCCCEECCCCCCHHHHHHHHHHHHHH---CCCEEEEEEEEECCCEEEEEEEC-CCCCCCCHHHCCCCCHHHHHHHHH
T ss_conf             10115752045369999999999999974---89479999997089629999868-965235214306976799999999


Q ss_pred             HHHHC
Q ss_conf             88633
Q gi|254780696|r  311 EKIKE  315 (316)
Q Consensus       311 e~~~~  315 (316)
T Consensus       312 e~~~~  316 (318)
T COG0189         312 EKFVR  316 (318)
T ss_pred             HHHHH
T ss_conf             99974