HHsearch alignment for GI: 254780696 and conserved domain: PRK12767
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional.
Probab=99.72 E-value=2.1e-15 Score=121.43 Aligned_cols=273 Identities=18% Similarity=0.253 Sum_probs=166.1
Q ss_pred CCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCC--EEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCHH
Q ss_conf 331899709988848476467999999998898--899995412489998999999999980777412650464435210
Q gi|254780696|r 4 IRNIAIQMNHISTVKVKEDSTFAIALEAQVRGY--QIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDLS 81 (316)
Q Consensus 4 ~~kI~fimDpi~~i~~~~DTT~~Lm~eAq~RGh--eV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L~ 81 (316)
T Consensus 1 m~nILvt-----~--~G--~~~~ii~~lk~~~~~~~Vi~~D~~~~a~--~~~~aD~~y~~P~~~d~~y~~~l-l~i~~~~ 68 (325)
T PRK12767 1 MMNILVT-----S--AG--RRVQLVKALKKSLLGGKVIGADISPLAP--ALYFADKFYVVPKVTDPNYIDAL-LDICKKE 68 (325)
T ss_pred CCEEEEE-----C--CC--CHHHHHHHHHHCCCCCEEEEECCCCCCC--CHHHCCEEEECCCCCCHHHHHHH-HHHHHHH
T ss_conf 9489998-----6--78--6899999999769985999968998995--34454889987888987899999-9999987
Q ss_pred HCCEEEEECCCCCCHHHHHH-HHHHHHHCCCCE-EECCHHHHHHCCCHHHHHHHHH----HCCCCEEECCHHHHHH-HHH
Q ss_conf 06366883288622479999-999986235850-4117488752565034334543----0443100037245568-888
Q gi|254780696|r 82 QMDVILIRQDPPFNMHYITS-TYLLEKINPETL-IVNNPFWIRNSPEKIFVTEFSE----LMPPTLISRDITQITR-FYL 154 (316)
Q Consensus 82 ~fD~i~iR~dPp~d~~yi~~-~~~Le~~~~~~~-viN~p~~i~~~~eKl~~~~~~~----~~P~T~vt~~~~~~~~-f~~ 154 (316)
T Consensus 69 ~id~iiP~~d~El--~~la~~~~~l~~--~gi~v~~~~~e~i~~~~DK~~~~~~l~~~gip~P~t~~~~~~~~~~~~~~~ 144 (325)
T PRK12767 69 NIDALIPLIDPEL--PLLAQHRDEFKE--IGVKVLVSSKEVIEICNDKWLTYEFLKENGINTPKSYLPEDLEDLLKALAE 144 (325)
T ss_pred CCCEEEECCCHHH--HHHHHHHHHHHH--CCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999997785026--689999999996--799895697999998549999999999759998982055899999999986
Q ss_pred HHH-HHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEE---CCEEEEEEEEECCC
Q ss_conf 521-43311168854344687448871158899999840013340021053445682699998---99886321220456
Q gi|254780696|r 155 EMK-DIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLFEKYPEPLMIQSYLPQIRDGDKRILLL---NGKPVGAVNRIPSE 230 (316)
Q Consensus 155 ~~~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~~~~~~~ii~Qefi~~~~~gD~Rv~vi---~g~~v~a~~R~~~~ 230 (316)
T Consensus 145 ~~~fP~vvKP~~g~gs~Gv~~i~~-~~el~~~~----~~-~~~~ivqe~i~---G~E~tvdv~~d~~g~~~~~~~~~r~- 214 (325)
T PRK12767 145 ELGFPLIVKPRDGSGSIGVFKVNN-REELEFLL----RY-NPNLIIQEFIE---GQEYTVDVLCDLNGEVISIVPRKRI- 214 (325)
T ss_pred HCCCCEEEEECCCCCCCCEEEECC-HHHHHHHH----HH-CCCEEEEECCC---CCEEEEEEEEECCCCEEEEEEEEEC-
T ss_conf 569966985356788775499799-99999999----74-89749870348---9889999999789999999998733-
Q ss_pred CCCCCCCCCCCCEEEEE-CCHHHHHHHHHHHHHHHHCCCEEEEEEEE----CCEEEEEECCCCHHHHHHHHHCCCCHHHH
Q ss_conf 86000000147311100-77899999999999999849879999511----78788983688303788997519998999
Q gi|254780696|r 231 VDNRSNIHAGGKAELTK-LTKIDLDICKRIGESLRERGLFFTGIDVI----GDYITEINVTSPTCIREIHRNGGENVASL 305 (316)
Q Consensus 231 ~~~r~Nl~~Gg~~~~~~-lt~~~~~i~~~~~~~L~~~gl~~~GiDii----g~~i~EvNvtsP~g~~~~~~~~~~~i~~~ 305 (316)
T Consensus 215 -----~~~~G~~~~~~~~~~~~l~~~~~~i~~~l~~~G--~~~vq~~~~~g~~~iiEiNP-Rf~g~~~l~~~aG~n~p~~ 286 (325)
T PRK12767 215 -----EVRAGETSKGVTVKNPELFKLAERIAEKLGARG--PLNIQCFVVDGEPYLFEINP-RFGGGYPLRAMAGFNEPDI 286 (325)
T ss_pred -----CCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCC--EEEEEEEEECCEEEEEEEEC-CCCCCHHHHHHHCCCHHHH
T ss_conf -----644578677530579999999999999819854--59999999899699999978-8786467398839899999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780696|r 306 FWDGI 310 (316)
Q Consensus 306 i~d~i 310 (316)
T Consensus 287 ~~~~~ 291 (325)
T PRK12767 287 LIRNL 291 (325)
T ss_pred HHHHH
T ss_conf 99998