HHsearch alignment for GI: 254780696 and conserved domain: PRK12815

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=98.54  E-value=2.2e-05  Score=55.69  Aligned_cols=281  Identities=17%  Similarity=0.232  Sum_probs=166.1

Q ss_pred             CCEEEEEECCHHHCCCC---CCCHHHHHHHHHHCCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCH
Q ss_conf             33189970998884847---646799999999889889999541248999899999999998077741265046443521
Q gi|254780696|r    4 IRNIAIQMNHISTVKVK---EDSTFAIALEAQVRGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDL   80 (316)
Q Consensus         4 ~~kI~fimDpi~~i~~~---~DTT~~Lm~eAq~RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L   80 (316)
T Consensus         7 ikkvLiiGsGpi~IGqa~EfDysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~e--Plt~e~v----~~Ii~~   80 (1068)
T PRK12815          7 IKKILVIGSGPIIIGQAAEFDYSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFE--PLTLEFV----KRIIRR   80 (1068)
T ss_pred             CCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEEC--CCCHHHH----HHHHHH
T ss_conf             8889998988153123446565699999999986998999889832620898744437885--8989999----999997


Q ss_pred             HHCCEEEEECCCCCCHHHHHHHHHHHHH---CC-CCEE-ECCHHHHHHCCCH-HHHH---HHHHHCCCCEEECCHHHHHH
Q ss_conf             0063668832886224799999999862---35-8504-1174887525650-3433---45430443100037245568
Q gi|254780696|r   81 SQMDVILIRQDPPFNMHYITSTYLLEKI---NP-ETLI-VNNPFWIRNSPEK-IFVT---EFSELMPPTLISRDITQITR  151 (316)
Q Consensus        81 ~~fD~i~iR~dPp~d~~yi~~~~~Le~~---~~-~~~v-iN~p~~i~~~~eK-l~~~---~~~~~~P~T~vt~~~~~~~~  151 (316)
T Consensus        81 E~Pd~il~~~G---GqtaLnla~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ea~~  157 (1068)
T PRK12815         81 EKPDALLATLG---GQTALNLAVKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEEEALR  157 (1068)
T ss_pred             HCCCEEEECCC---CHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHH
T ss_conf             49998986777---847999999999759778659649679999998645999999999976999997052199999999


Q ss_pred             HHHHHH-HHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC-CCCCCEEECCCCCCCCCEEEEEE---CC-E-EEEEE
Q ss_conf             888521-433111688543446874488711588999998400-13340021053445682699998---99-8-86321
Q gi|254780696|r  152 FYLEMK-DIIIKPLYGNGGTGVFRITLGDRNFSSLIEMLFEKY-PEPLMIQSYLPQIRDGDKRILLL---NG-K-PVGAV  224 (316)
Q Consensus       152 f~~~~~-~vViKPl~g~~G~gV~~i~~~~~~~~~~~e~~~~~~-~~~ii~Qefi~~~~~gD~Rv~vi---~g-~-~v~a~  224 (316)
T Consensus       158 ~a~~ig~PvivRps~~lGg~g~~i~-~n~~eL~~~~~~~~~~S~~~~vlie~sl~gwkE--ie~ev~RD~~~n~i~vc~m  234 (1068)
T PRK12815        158 FAEKIGFPIIVRPAYTLGGDGGGIA-ENEEELEQLARQGLQASPIHQCLLEESIAGWKE--IEYEVMRDRNDNCVTVCNM  234 (1068)
T ss_pred             HHHHCCCCEEEEECCCCCCCCCEEE-CCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCEE--EEEEEEEECCCCEEEEEEC
T ss_conf             9986699899983610668965044-599999999999996399985786501179769--9999999889897998541


Q ss_pred             EEECCCCCCCCCCCCCCCEE---EEECCHHHHH----HHHHHHHHHHHCCCEEEEEEE---E---C--CEEEEEECCCCH
Q ss_conf             22045686000000147311---1007789999----999999999984987999951---1---7--878898368830
Q gi|254780696|r  225 NRIPSEVDNRSNIHAGGKAE---LTKLTKIDLD----ICKRIGESLRERGLFFTGIDV---I---G--DYITEINVTSPT  289 (316)
Q Consensus       225 ~R~~~~~~~r~Nl~~Gg~~~---~~~lt~~~~~----i~~~~~~~L~~~gl~~~GiDi---i---g--~~i~EvNvtsP~  289 (316)
T Consensus       235 EnidP-----~GIHTGDSi~vaP~qTL~d~e~q~lR~~a~~I~~~l---gv-~G~~NiQFAv~p~~~~~~VIEvN---PR  302 (1068)
T PRK12815        235 ENIDP-----VGVHTGDSIVVAPSQTLTDDEYQMLRSASLKIIRAL---GV-VGGCNIQFALDPRSKQYYVIEVN---PR  302 (1068)
T ss_pred             CCCCC-----CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHC---CE-ECCEEEEEEECCCCCCEEEEECC---CC
T ss_conf             23544-----543567745345781269999999999999999972---80-10105799886999828999647---86


Q ss_pred             HHH---HHHHHCCCCHHHHHHH
Q ss_conf             378---8997519998999999
Q gi|254780696|r  290 CIR---EIHRNGGENVASLFWD  308 (316)
Q Consensus       290 g~~---~~~~~~~~~i~~~i~d  308 (316)
T Consensus       303 ~SRssalaSKATGyPiAkvaak  324 (1068)
T PRK12815        303 VSRSSALASKATGYPIAKIAAK  324 (1068)
T ss_pred             CCCHHHHHHHHCCCCHHHHHHH
T ss_conf             2202478887508848999999