HHsearch results for GI: 254780696 and protein with PDBid: 2pn1_A
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15}
Probab=99.60 E-value=6.9e-15 Score=116.57 Aligned_cols=262 Identities=13% Similarity=0.060 Sum_probs=149.1
Q ss_pred HHHHHHHH--CCCEEEEEEHHHEEEECCEEEEEEEEEEEECCCCCEEEECCCCCCCHHHCCEEEEECCCCCCHHHHHHHH
Q ss_conf 99999998--8988999954124899989999999999807774126504644352100636688328862247999999
Q gi|254780696|r 26 AIALEAQV--RGYQIFHYTPDQLYMRDSKIYANTQPLSLDEKKEQYYSLGEEKIIDLSQMDVILIRQDPPFNMHYITSTY 103 (316)
Q Consensus 26 ~Lm~eAq~--RGheV~~~~~~dL~~~~g~v~A~~~~i~i~~~~~~~f~~~~~~~~~L~~fD~i~iR~dPp~d~~yi~~~~ 103 (316)
.|+++.++ ++++|+.++.+....... ++....+--..+...|.+.- .+...-.+.|.|+... |.+-.....
T Consensus 17 ~l~~~~~~~~~~~~vi~~D~~~~~~~~~--~~D~~~~~p~~~~~~~~~~l-~~i~~~~~id~iip~~----d~~~~~~a~ 89 (331)
T 2pn1_A 17 KLVEYFVKEFKTGRVSTADCSPLASALY--MADQHYIVPKIDEVEYIDHL-LTLCQDEGVTALLTLI----DPELGLLAQ 89 (331)
T ss_dssp HHHHHHHHHCCSSEEEEEESCTTCGGGG--GSSSEEECCCTTSTTHHHHH-HHHHHHHTCCEEEESS----HHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHH--HCCEEEECCCCCCHHHHHHH-HHHHHHHCCCEEEECC----CHHHHHHHH
T ss_conf 9999999749999899988999985788--45988987998856799999-9999995999999788----657999999
Q ss_pred HHHHHC-CCCE-EECCHHHHHHCCCHHHHHHHHH----HCCCCEEECCHHHHHHHHHHHH-HHHHHCCCCCCCCCEEEEC
Q ss_conf 998623-5850-4117488752565034334543----0443100037245568888521-4331116885434468744
Q gi|254780696|r 104 LLEKIN-PETL-IVNNPFWIRNSPEKIFVTEFSE----LMPPTLISRDITQITRFYLEMK-DIIIKPLYGNGGTGVFRIT 176 (316)
Q Consensus 104 ~Le~~~-~~~~-viN~p~~i~~~~eKl~~~~~~~----~~P~T~vt~~~~~~~~f~~~~~-~vViKPl~g~~G~gV~~i~ 176 (316)
..+.++ .++. +.|++.+++.+.||..+.++.. ++|+|+...+..+......+.+ |+|+||..|+||+||+++.
T Consensus 90 ~~~~l~~~g~~v~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~e~~~~~~~~~~P~vvKP~~g~gs~gv~~i~ 169 (331)
T 2pn1_A 90 ATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYATMASFEEALAAGEVQLPVFVKPRNGSASIEVRRVE 169 (331)
T ss_dssp THHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEESSHHHHHHHHHTTSSCSCEEEEESBC----------
T ss_pred HHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEC
T ss_conf 99999978998987989999987499999999998699832221334658899988753897799868889888759974
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEE--ECCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 887115889999984001334002105344568269999--899886321220456860000001473111007789999
Q gi|254780696|r 177 LGDRNFSSLIEMLFEKYPEPLMIQSYLPQIRDGDKRILL--LNGKPVGAVNRIPSEVDNRSNIHAGGKAELTKLTKIDLD 254 (316)
Q Consensus 177 ~~~~~~~~~~e~~~~~~~~~ii~Qefi~~~~~gD~Rv~v--i~g~~v~a~~R~~~~~~~r~Nl~~Gg~~~~~~lt~~~~~ 254 (316)
.. .++...++ . ..++++||||+.... .+-+++ .+|+++....|.. ..++...+ ........++..+
T Consensus 170 ~~-~el~~~~~----~-~~~~iiqe~i~G~e~-~v~~~~~~~~g~~~~~~~~~~--~~~~~g~~---~~~~~~~~~~i~~ 237 (331)
T 2pn1_A 170 TV-EEVEQLFS----K-NTDLIVQELLVGQEL-GVDAYVDLISGKVTSIFIKEK--LTMRAGET---DKSRSVLRDDVFE 237 (331)
T ss_dssp -------------------CEEEEECCCSEEE-EEEEEECTTTCCEEEEEEEEE--EEEETTEE---EEEEEECCHHHHH
T ss_pred CH-HHHHHHHH----H-CCCHHHHHHHCCCEE-EEEEEEECCCCCEEEEEEEEE--CCCCCCCC---CCCCHHHHHHHHH
T ss_conf 79-99999987----2-612212454067332-799999857991654301451--13346787---6653011199999
Q ss_pred HHHHHHHHHHHCCCE-EEEEEEE----CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999999984987-9999511----7878898368830378899751999899999999
Q gi|254780696|r 255 ICKRIGESLRERGLF-FTGIDVI----GDYITEINVTSPTCIREIHRNGGENVASLFWDGI 310 (316)
Q Consensus 255 i~~~~~~~L~~~gl~-~~GiDii----g~~i~EvNvtsP~g~~~~~~~~~~~i~~~i~d~i 310 (316)
++.++++.| |+. .+++|++ +.|++|||. =++|--.+...+|.|....+++.+
T Consensus 238 ~~~~i~~~l---~~~G~~~vd~~~~~~~~~viEiNp-R~~g~~~~~~~~G~n~~~~~~~~~ 294 (331)
T 2pn1_A 238 LVEHVLDGS---GLVGPLDFDLFDVAGTLYLSEINP-RFGGGYPHAYECGVNFPAQLYRNL 294 (331)
T ss_dssp HHHHHHTTT---CCCEEEEEEEEEETTEEEEEEEES-SCCTTHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHC---CCCCEEEEEEEEECCCEEEEEECC-CCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf 999999982---972179999999899499999935-899843889984989999999997