HHsearch results for GI: 254780697 and protein with PDBid: 2oar_A
>2oar_A Large-conductance mechanosensitive channel; stretch activated ION channel mechanosensitive, membrane protein; 3.50A {Mycobacterium tuberculosis H37RA} SCOP: f.16.1.1
Probab=100.00 E-value=0 Score=307.69 Aligned_cols=127 Identities=33% Similarity=0.523 Sum_probs=109.3
Q ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCC
Q ss_conf 53012789999999836669999999999989999999999766667787504656744325762766663112321016
Q gi|254780697|r 2 FQGTPVFNEFKKFIARGNVIDLSVGIIIGGAFNRVVQSIVEDIMMPLVGCVMGNGTDFSNYFLPLSSEIKSSLISEARKQ 81 (141)
Q Consensus 2 ~k~~~mlkeFK~Fi~rGNVidLAVavIIG~AF~~iV~slv~diimPlIg~i~g~g~~f~~~~~~l~~~~~~~~~~~~~~~ 81 (141)
.|.++||||||+|++||||+|||||||||+||++||+|||+|||||+||++.++ .+++.+.+.+ ...+
T Consensus 19 ~~~k~mlkeFKeFi~rGNViDLAVgVIIGaAF~~IV~SlV~dIImPlIg~i~~~-~~~~~~~l~~-----------~~~~ 86 (174)
T 2oar_A 19 DDDKHMLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVN-AQSDVGILRI-----------GIGG 86 (174)
T ss_dssp -----CHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEEECCCCTT-----------TCCS
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHEE-----------ECCC
T ss_conf 899999999999997287677779999999899999999987542134203457-6320233112-----------1158
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 60000989999999999999999-999999999841234889868356999999999640
Q gi|254780697|r 82 GAVFAYGSFASVLVNFFILAGVV-FVLIQFMNKLVKQTENVKNPPAEVQLLTEIRDLLQK 140 (141)
Q Consensus 82 ~~~i~yG~fl~aiI~FlIiA~vi-Flivk~~nk~~~~~e~~~~~~~e~~LL~EIRDlLkk 140 (141)
+..+.||+|++++|||+|+||++ |+++++|||+++++|+++++|+|++||+||||+|||
T Consensus 87 ~~~i~yG~Fl~aiInFlIiA~vvyFlivk~~nklk~k~e~~~~~~~e~~LL~EIRDlLk~ 146 (174)
T 2oar_A 87 GQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQ 146 (174)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 704539899999999999999999999999998622678998789478999999999997