HHsearch alignment for GI: 254780698 and conserved domain: COG2027
>COG2027 DacB D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].
Probab=97.44 E-value=0.0017 Score=39.84 Aligned_cols=140 Identities=14% Similarity=0.054 Sum_probs=90.4
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHH-HHCC--CCCCEECCCCCCCCCCCCCHHHHHH
Q ss_conf 88302457889987777765455420100------5789998887688-7266--1222002454333344530134555
Q gi|254780698|r 126 FTTEQGILALITRSANDVSTAFGEFISGS------EKKFAILMSNKAK-KIGM--QNTIYKNASGLHDKNQITTARDQAI 196 (336)
Q Consensus 126 ~tv~dLl~~lli~S~NdAa~alAe~i~Gs------~~~Fv~~MN~~A~-~lGl--~~t~f~np~Gl~~~~~~tta~Dla~ 196 (336)
T Consensus 293 ~PL~~lLk~m~k~SnN~~Ae~L~~~ig~~~~~~gs~~~~~~~v~~~l~~~~GId~~~~vL~DGSGLSr-~Nritpr~l~~ 371 (470)
T COG2027 293 APLSQLLKDMNKYSDNLMAEALFRAIGGAIKRPGSVSAAADAVRQILLQRAGIDLAGLVLADGSGLSR-DNRITPRTLVQ 371 (470)
T ss_pred CCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCH-HCCCCHHHHHH
T ss_conf 88899999998615089999999984534478742667789999999987398856648741898871-10229899999
Q ss_pred HHHHHCCCCEEEEEEEEEEEEEECCEEEEEECHHC-CCCCCCEEEEECCCCCCCCEEEEEEE-ECCEEEEEEEECC
Q ss_conf 55420136204677611565434786997210102-57687005652242333717999999-7897999998179
Q gi|254780698|r 197 LGILLRKNFPQYYKYFSIRKFRYRNRIITNHNKLL-NKMHNIDGIKTGYTRNSGFNIVTSLR-YKDDPIVAVVMGM 270 (336)
Q Consensus 197 l~~~~~~~~p~~~~~~s~~~~~~~~~~~~n~N~lL-~~~~g~~G~KTG~T~~AG~clv~~a~-~~g~~lI~Vvlg~ 270 (336)
T Consensus 372 ~Lq~~~~~-~~~~~~~dsLPIAG~~GTL~~R--~~~~~~~G~v~aKTGTL~-gV~aLaGyv~~~~g~~l~Fai~~N 443 (470)
T COG2027 372 LLQAAAQS-PAAAALIDSLPIAGVDGTLRNR--LRGTGAAGKVRAKTGTLT-GVSALAGYVTTASGRKLAFAIILN 443 (470)
T ss_pred HHHHHHCC-CHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCEEEEECCCC-CCHHHEEEEECCCCCEEEEEEECC
T ss_conf 99998729-7177899847737778750131--446787871788631232-404111068768898899999658