HHsearch alignment for GI: 254780698 and conserved domain: COG2027
>COG2027 DacB D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].
Probab=96.31 E-value=0.011 Score=34.82 Aligned_cols=101 Identities=16% Similarity=0.081 Sum_probs=57.9
Q ss_pred CCEEEEECCCCEEEEECCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-----CCCCCCCCCCCCCEEE
Q ss_conf 31999998896283113699888-81387999999999975558988554111536761-----2454432257885688
Q gi|254780698|r 54 YSSIVIDVNKNQMTGFKQDEPRY-PASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAA-----TQNPSKLYLKEKTYFT 127 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~Kn~~~~~-PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~-----~~~~s~~~l~~g~~~t 127 (336)
T Consensus 38 ~~i~v~~~~~~~~~~~~~~~~~~~PASt~kl~T~~aal~~LG~-----~~r~~T~~~~~g~~~g~l~Gnl~~~~~Gdp~l 112 (470)
T COG2027 38 VGITVQDLDTGQPAYDYNADTMANPASTQKLLTALAALSVLGP-----DFRFTTELYTSGVKNGVLNGNLYLRGSGDPTL 112 (470)
T ss_pred EEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCC-----CCCHHHHHHCCCCCCCCCCCEEEEECCCCCCC
T ss_conf 5788754688851110376556788511678899999985185-----41000254116643571043489963688777
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 30245788998777776545542010057899
Q gi|254780698|r 128 TEQGILALITRSANDVSTAFGEFISGSEKKFA 159 (336)
Q Consensus 128 v~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv 159 (336)
T Consensus 113 ~~~dl~~l~~~l~~~gv~ai~g~l~lD~s~~~ 144 (470)
T COG2027 113 TREDLTKLAPDLKASGVTAITGLLVLDTSVFA 144 (470)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCEEECCEEEC
T ss_conf 87888899999986251001145664123332