HHsearch alignment for GI: 254780698 and conserved domain: PRK09506
>PRK09506 mrcB penicillin-binding protein 1b; Reviewed.
Probab=97.00 E-value=0.024 Score=32.86 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=81.0
Q ss_pred CCEEEEECCCCEEEEE---CC--------C-C-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC-CC-CCC
Q ss_conf 3199999889628311---36--------9-9-8888138799999999997555898855411153676124-54-432
Q gi|254780698|r 54 YSSIVIDVNKNQMTGF---KQ--------D-E-PRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQ-NP-SKL 118 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~---Kn--------~-~-~~~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~-~~-s~~ 118 (336)
T Consensus 470 ~A~VviD~~TG~V~AmVGG~d~~~sgfNRA~~A~RQ~GSt~KPfvY~aAL~~--~~~~~~~T~l~D~Pi~~~~~~G~~W~ 547 (839)
T PRK09506 470 TAMVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQ--PDKYRLNTWIADAPISLRQPNGQVWS 547 (839)
T ss_pred EEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHC--CCCCCCCCEECCCCEEEECCCCCCCC
T ss_conf 5799997899859999748887766761345467799765118999999866--79977764524535486468987438
Q ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 25788568830245788998777776545542010057899988876887266122200245433334453013455555
Q gi|254780698|r 119 YLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILG 198 (336)
Q Consensus 119 ~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta~Dla~l~ 198 (336)
T Consensus 548 P~Nyd~~~~G~VtLr~ALa~S~N~paVrL~~~vGl~------~v~~~~~~lGi~~~~~~~~pSlaLGa~evSplemA~AY 621 (839)
T PRK09506 548 PQNDDRRYSGRVMLVDALTRSMNVPTVNLGMALGLP------AVTDTWIKLGVPKDQLNPVPAMLLGALNLTPIEVAQAF 621 (839)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHH------HHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
T ss_conf 864899865712199999858389999999987989------99999998699866688886731077888899999999
Q ss_pred HHH
Q ss_conf 420
Q gi|254780698|r 199 ILL 201 (336)
Q Consensus 199 ~~~ 201 (336)
T Consensus 622 atf 624 (839)
T PRK09506 622 QTI 624 (839)
T ss_pred HHH
T ss_conf 999