HHsearch alignment for GI: 254780698 and conserved domain: PRK10001
>PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional.
Probab=100.00 E-value=0 Score=547.96 Aligned_cols=250 Identities=29% Similarity=0.421 Sum_probs=236.4
Q ss_pred CCCCCCCEEEEECCCCEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC------CCCCCCCC
Q ss_conf 148763199999889628311369988-88138799999999997555898855411153676124------54432257
Q gi|254780698|r 49 HAKPKYSSIVIDVNKNQMTGFKQDEPR-YPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQ------NPSKLYLK 121 (336)
Q Consensus 49 ~~~~~~sAiv~D~~tG~ILy~Kn~~~~-~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~------~~s~~~l~ 121 (336)
T Consensus 35 P~i~A~sail~D~~TG~VLy~Kn~d~~~~pAS~TKlMTa~lv~eai~~g~i~ld~~v~vs~~a~~~~~~~~~g~S~~~l~ 114 (400)
T PRK10001 35 PSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLK 114 (400)
T ss_pred CCCCCEEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCEEEEC
T ss_conf 97453189999999995945309399848779999999999999986599987864772489985247655687424423
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 88568830245788998777776545542010057899988876887266122200245433334453013455555420
Q gi|254780698|r 122 EKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILL 201 (336)
Q Consensus 122 ~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta~Dla~l~~~~ 201 (336)
T Consensus 115 ~g~~~tv~dLL~~lli~SaNDAA~aLAe~i~Gs~~~Fv~~MN~kA~~LG~~nT~F~np~GL~~~~~~sTA~Dla~la~~l 194 (400)
T PRK10001 115 PGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKAL 194 (400)
T ss_pred CCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 79898999999998774425999999972355689999999999998289875435664366754445599999999988
Q ss_pred CCCCEEEEEEEEEEEEEECCEEEEEECHHCCCC-CCCEEEEECCCCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHH
Q ss_conf 136204677611565434786997210102576-8700565224233371799999978979999981799878999999
Q gi|254780698|r 202 RKNFPQYYKYFSIRKFRYRNRIITNHNKLLNKM-HNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERDQKA 280 (336)
Q Consensus 202 ~~~~p~~~~~~s~~~~~~~~~~~~n~N~lL~~~-~g~~G~KTG~T~~AG~clv~~a~~~g~~lI~Vvlg~~s~~~R~~~~ 280 (336)
T Consensus 195 ~~~~p~~~~~~~~~~~t~~~~~~~N~N~lL~~~~~~vdGlKTG~t~~AG~~lv~ta~r~g~rlI~VVlga~s~~~R~~dt 274 (400)
T PRK10001 195 IHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNES 274 (400)
T ss_pred HCCCCHHEEEEEEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCHHCCCCHHHEEECCCCEEEEEEECCCCCCHHHHHH
T ss_conf 60683413753478998788897221431126777850376133432377143244338958999994899920799999
Q ss_pred HHHHHHHHCCCCCEEEEE
Q ss_conf 999999840154034320
Q gi|254780698|r 281 LELITSFLEKKTLKHQQT 298 (336)
Q Consensus 281 ~~Ll~~~f~~~~~~~~~~ 298 (336)
T Consensus 275 ~~Ll~ygf~~f~~~~~~~ 292 (400)
T PRK10001 275 EKLLTWGFRFFETVTPIK 292 (400)
T ss_pred HHHHHHHHHHCEEEEEEC
T ss_conf 999999986168887504