HHsearch alignment for GI: 254780698 and conserved domain: PRK11240
>PRK11240 penicillin-binding protein 1C; Provisional.
Probab=93.83 E-value=0.45 Score=25.30 Aligned_cols=222 Identities=15% Similarity=0.094 Sum_probs=106.7
Q ss_pred CCCEEEEECCCCEEEEE-C--C--C----------C-CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 63199999889628311-3--6--9----------9-8888138799999999997555898855411153676124544
Q gi|254780698|r 53 KYSSIVIDVNKNQMTGF-K--Q--D----------E-PRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPS 116 (336)
Q Consensus 53 ~~sAiv~D~~tG~ILy~-K--n--~----------~-~~~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s 116 (336)
T Consensus 300 ~~A~vviD~~tg~V~A~VG~~d~~~~~~~g~vd~~~A~RqPGStlKPfvYa~---Ale~G~i~p~s~l~D~P~~--~g~- 373 (770)
T PRK11240 300 SLAMIVVDHTDMAVRGWVGSVDLNDDSRFGHVDMVNAIRSPGSVLKPFVYGL---ALDDGLIHPASLLQDVPRR--TGD- 373 (770)
T ss_pred CCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHCCCCCCCCEECCCCCC--CCC-
T ss_conf 6359999789980899983766675444676330203568962388999999---9976999988784168701--488-
Q ss_pred CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCE-ECCCCCC--CCCCCCCHHH
Q ss_conf 322578856883024578899877777654554201005789998887688726612220-0245433--3344530134
Q gi|254780698|r 117 KLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIY-KNASGLH--DKNQITTARD 193 (336)
Q Consensus 117 ~~~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f-~np~Gl~--~~~~~tta~D 193 (336)
T Consensus 374 y~P~Nfd~~~~G~vt~r~AL~~SlNipAV~ll~~~G~--~~~~~----~l~~~Gi~~~l~~~~~~~LslaLGg~evtl~e 447 (770)
T PRK11240 374 YRPGNFDSGFHGPVSMSEALVRSLNLPAVQVLEAYGP--KRFAA----KLRNVGLPLYLPAGAAPNLSLILGGAGARLED 447 (770)
T ss_pred CCCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHCH--HHHHH----HHHHCCCCCCCCCCCCCCCCEECCCCCCCHHH
T ss_conf 6870278872061109999986547999999998796--99999----99973997567877789853331576888999
Q ss_pred HHHHHHHHCCC----CEEEEEEEEEEEEE-EC------------CEEEEEECHHCCCCCCCEEEEECCCCCCCCEEEEEE
Q ss_conf 55555420136----20467761156543-47------------869972101025768700565224233371799999
Q gi|254780698|r 194 QAILGILLRKN----FPQYYKYFSIRKFR-YR------------NRIITNHNKLLNKMHNIDGIKTGYTRNSGFNIVTSL 256 (336)
Q Consensus 194 la~l~~~~~~~----~p~~~~~~s~~~~~-~~------------~~~~~n~N~lL~~~~g~~G~KTG~T~~AG~clv~~a 256 (336)
T Consensus 448 La~aYa~~An~G~~~~~~~~~~~~~~~~~v~s~~aa~~~~~iL~~~~r~~~~~~l~~-~~pvAgKTGTS~g--~RDaWfv 524 (770)
T PRK11240 448 MAAAYSAFARHGKAAKLRLQPDDPLLERPLMSPGAAWIIRRIMADEAQPLPDAALPR-VVPLAWKTGTSYG--YRDAWAI 524 (770)
T ss_pred HHHHHHHHHCCCEECCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCC-CCCCEECCCCCCC--CCCEEEE
T ss_conf 999999997798433517715886332136888889999999875044430110023-7762443467888--7333898
Q ss_pred EECCEEEEEEEECCCCHHHH-----HHHHHHHHHHHHC
Q ss_conf 97897999998179987899-----9999999999840
Q gi|254780698|r 257 RYKDDPIVAVVMGMPTSQER-----DQKALELITSFLE 289 (336)
Q Consensus 257 ~~~g~~lI~Vvlg~~s~~~R-----~~~~~~Ll~~~f~ 289 (336)
T Consensus 525 G~tp~ytvgVWvGn~Dg~p~~~~~G~~~AaPllf~i~~ 562 (770)
T PRK11240 525 GVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNN 562 (770)
T ss_pred EECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 63598599999868999938774060235879999999