HHsearch results for GI: 254780698 and protein with PDBid: 1alq_A
>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1
Probab=99.92 E-value=1.8e-25 Score=169.60 Aligned_cols=190 Identities=17% Similarity=0.058 Sum_probs=143.8
Q ss_pred CEEEEECCCCEEEEECCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHH
Q ss_conf 1999998896283113699888-813879999999999755589885541115367612454432257885688302457
Q gi|254780698|r 55 SSIVIDVNKNQMTGFKQDEPRY-PASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPSKLYLKEKTYFTTEQGIL 133 (336)
Q Consensus 55 sAiv~D~~tG~ILy~Kn~~~~~-PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s~~~l~~g~~~tv~dLl~ 133 (336)
+..++|.+||+++ +.|+++++ |||++|+|+++.+++.+++++ +++++++++.....++......+|+.++++||+.
T Consensus 61 gv~~~D~~tG~~~-~~n~d~~~~~ASt~Kl~~a~~~l~~v~~g~--ld~~v~i~~~~~~~~~~~~~~~~g~~~tl~dll~ 137 (266)
T 1alq_A 61 GVYALDTKSGKEV-KFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKALIE 137 (266)
T ss_dssp EEEEEETTTCCEE-EESTTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEEECGGGCCSSCTTGGGGTTEEEEHHHHHH
T ss_pred EEEEEECCCCCEE-EECCCCCCCCHHHHHHHHHHHHHHHHHCCC--CCCEEEECHHHHHCCCCCCCCCCCCCEEHHHHHH
T ss_conf 9999999999888-888998353478999999999999720478--7751675388863369731046897235999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCC------CCCCCCCHHHHHHHHHHHCCCCEE
Q ss_conf 88998777776545542010057899988876887266122200245433------334453013455555420136204
Q gi|254780698|r 134 ALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLH------DKNQITTARDQAILGILLRKNFPQ 207 (336)
Q Consensus 134 ~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~------~~~~~tta~Dla~l~~~~~~~~p~ 207 (336)
++++.|+|+|+.+|+++++|.. .||+.++++|++++++.+..+.. +..+++|++|++.+..++.....
T Consensus 138 ~mi~~SdN~Aa~~L~~~lGg~~-----~~~~~~~~~G~~~t~l~~~~~~~~~~~~~~~~n~tTa~d~a~ll~~l~~~~~- 211 (266)
T 1alq_A 138 ASMTYSDNTANNKIIKEIGGIK-----KVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGK- 211 (266)
T ss_dssp HHHHHCCHHHHHHHHHHHTCHH-----HHHHHHHHTTCCSCCCCCCTTGGGCCCTTCCTTEECHHHHHHHHHHHTTSSS-
T ss_pred HHHHCCHHHHHHHHHHHHCCCH-----HHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-
T ss_conf 8775487999999999977616-----8999999747322762677765556777874444499999999999985787-
Q ss_pred EEEEEEEEEEEECCEEEEEECHHCCC-CC-C-CEEEEECCCCCCC-CEEEE
Q ss_conf 67761156543478699721010257-68-7-0056522423337-17999
Q gi|254780698|r 208 YYKYFSIRKFRYRNRIITNHNKLLNK-MH-N-IDGIKTGYTRNSG-FNIVT 254 (336)
Q Consensus 208 ~~~~~s~~~~~~~~~~~~n~N~lL~~-~~-g-~~G~KTG~T~~AG-~clv~ 254 (336)
+....+..-..+-. ...++|.+|.. .| + ..|.|||++...| +|-++
T Consensus 212 ls~~~~~~l~~~m~-~~~~~~~~l~~~lP~~~~Va~KTGt~~~~G~~~D~a 261 (266)
T 1alq_A 212 LSKENKKFLLDLML-NNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVA 261 (266)
T ss_dssp CCHHHHHHHHHHHH-TCGGGTTTHHHHSCTTCEEEEEEEECSSTTCEEEEE
T ss_pred CCHHHHHHHHHHHH-CCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 89999999999996-396443005543999988999650577677621599