HHsearch results for GI: 254780698 and protein with PDBid: 1k55_A
>1k55_A Beta lactamase OXA-10; antibiotic resistance, carbamylation, hydrolase; HET: KCX SO4; 1.39A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1e4d_A* 1ewz_A 1k54_A* 1e3u_A* 1k56_A* 1k57_A* 3lce_A* 1k4f_A* 1k4e_A* 1k6r_A* 1k6s_A* 2wgv_A* 2wgw_A* 1fof_A 1e3u_D 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2rl3_A* ...
Probab=98.73 E-value=1.7e-07 Score=62.28 Aligned_cols=185 Identities=15% Similarity=0.012 Sum_probs=108.8
Q ss_pred CCEEEEECCCCEEEEE-CC-CCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC-CCCCCEEEEE
Q ss_conf 3199999889628311-36-99888-8138799999999997555898855411153676124544322-5788568830
Q gi|254780698|r 54 YSSIVIDVNKNQMTGF-KQ-DEPRY-PASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQNPSKLY-LKEKTYFTTE 129 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~-Kn-~~~~~-PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~~~~s~~~-l~~g~~~tv~ 129 (336)
-+++++|.+||+++.- -| +.+++ |+|+-|++|++.+|| +|.+..++.+.... +.... -.....++
T Consensus 19 G~~v~~d~~tg~~~~~~~~ra~~~~~PGStfKp~~~~aaLe---~G~i~~~~~~~~~~------g~~~~~~~~~g~~t-- 87 (246)
T 1k55_A 19 GVFVLCKSSSKSCATNDLARASKEYLPASTFKIPNAIIGLE---TGVIKNEHQVFKWD------GKPRAMKQWERDLT-- 87 (246)
T ss_dssp EEEEEEESSTTSEEESCHHHHTCCBCCGGGGHHHHHHHHHH---TTSSCSTTCEECCC------SCCCSSGGGSSCEE--
T ss_pred EEEEEEECCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHHH---HCCCCCCCCCCCCC------CCCCCCCCCCCCCC--
T ss_conf 58999989999688637667626879974389999999998---08999744553689------95667677799979--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCC--CCCCCCCCHHHHHHHHHHHCCCCEE
Q ss_conf 24578899877777654554201005789998887688726612220024543--3334453013455555420136204
Q gi|254780698|r 130 QGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGL--HDKNQITTARDQAILGILLRKNFPQ 207 (336)
Q Consensus 130 dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl--~~~~~~tta~Dla~l~~~~~~~~p~ 207 (336)
+...+..|.|.+.+-|++.++- +.+.+.++++|+.+......... ...+...|+..|+.....+...-..
T Consensus 88 --l~~Al~~S~N~~~~~l~~~lG~------~~~~~~~~~~G~g~~~~~~~~~~~~~~g~~~iTPlq~a~~~~~iangg~~ 159 (246)
T 1k55_A 88 --LRGAIQVSAVPVFQQIAREVGE------VRMQKYLKKFSYGNQNISGGIDKFWLEGQLRISAVNQVEFLESLYLNKLS 159 (246)
T ss_dssp --HHHHHHTTCHHHHHHHHHHHCH------HHHHHHHHHTTCTTCCCCSCTTTTTTTSSCCBCHHHHHHHHHHHHTTCSS
T ss_pred --HHHHHHHCCCHHHHHHHHHCCH------HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf --9999997482999999998398------99999999839998878887653444698655699999999999729987
Q ss_pred EEEEEEEEEEEECCEEEEEECHHC---CCCCCCEEEEECCCCCC-----CC-EEEEEEEECCEEEEEEEE
Q ss_conf 677611565434786997210102---57687005652242333-----71-799999978979999981
Q gi|254780698|r 208 YYKYFSIRKFRYRNRIITNHNKLL---NKMHNIDGIKTGYTRNS-----GF-NIVTSLRYKDDPIVAVVM 268 (336)
Q Consensus 208 ~~~~~s~~~~~~~~~~~~n~N~lL---~~~~g~~G~KTG~T~~A-----G~-clv~~a~~~g~~lI~Vvl 268 (336)
+... +. .-...++ .......+.|||+.... .+ -||+.+..++.+++.+|+
T Consensus 160 ~sp~------~~-----~~~~~~m~~~~~~g~~vagKTGTa~~g~~~~~~~aWFvGf~p~~~p~~~~av~ 218 (246)
T 1k55_A 160 ASKE------NQ-----LIVKEALVTEAAPEYLVHSKTGFSGVGTESNPGVAWWVGWVEKETEVYFFAFN 218 (246)
T ss_dssp SCHH------HH-----HHHHHHTEEEEETTEEEEEEEEECCCCCSSSCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCHH------HH-----HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEE
T ss_conf 7889------99-----99999999877664221444512220578998538999999879985999999