HHsearch results for GI: 254780698 and protein with PDBid: 1w5d_A
>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} SCOP: e.3.1.3 PDB: 2j9p_A*
Probab=99.38 E-value=5.2e-12 Score=89.28 Aligned_cols=136 Identities=11% Similarity=0.141 Sum_probs=93.6
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHCCCC--CCEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 83024578899877777654554201------005789998887688726612--2200245433334453013455555
Q gi|254780698|r 127 TTEQGILALITRSANDVSTAFGEFIS------GSEKKFAILMSNKAKKIGMQN--TIYKNASGLHDKNQITTARDQAILG 198 (336)
Q Consensus 127 tv~dLl~~lli~S~NdAa~alAe~i~------Gs~~~Fv~~MN~~A~~lGl~~--t~f~np~Gl~~~~~~tta~Dla~l~ 198 (336)
++.++++.|+-.|.|-.|..|...++ ++.+.-...+.+..+++|... ..+.+.+||.. .+..|+++|+.+.
T Consensus 287 pL~~lv~~mlk~SdN~~AE~L~~~lg~~~~~~~s~~~g~~~v~~~l~~~gi~~~~~~l~DGSGLSr-~Nrisp~~l~~lL 365 (462)
T 1w5d_A 287 PLSKLFVPFMKLSNNGHAEVLVKEMGKVKKGEGSWEKGLEVLNSTLPEFGVDSKSLVLRDGSGISH-IDAVSSDQLSQLL 365 (462)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHHHHHHTSCCSHHHHHHHHHHHGGGGTCCGGGCBCSCSSSCCT-TCBBCHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC-CCCCCHHHHHHHH
T ss_conf 199999999843872999999999999737998668899999999997278866527755887875-5652999999999
Q ss_pred HHHCCCCEEEEEEEEEEEEEECC-------EEEEEECHHCC-CCCCCEEEEECCCCCCCCEEEEEEE-ECCEEEEEEEEC
Q ss_conf 42013620467761156543478-------69972101025-7687005652242333717999999-789799999817
Q gi|254780698|r 199 ILLRKNFPQYYKYFSIRKFRYRN-------RIITNHNKLLN-KMHNIDGIKTGYTRNSGFNIVTSLR-YKDDPIVAVVMG 269 (336)
Q Consensus 199 ~~~~~~~p~~~~~~s~~~~~~~~-------~~~~n~N~lL~-~~~g~~G~KTG~T~~AG~clv~~a~-~~g~~lI~Vvlg 269 (336)
.++..+ |.+..+... ....+ .++. |++.. .-.|-.=.|||+.+ .-.||.+... ++|++++.++|-
T Consensus 366 ~~~~~~-~~~~~~~~s--LPvaG~~~~~v~GTL~--~R~~~~~~~g~v~aKTGTL~-~v~aLaGyv~t~~G~~~~Fsi~~ 439 (462)
T 1w5d_A 366 YDIQDQ-SWFSAYLNS--LPVAGNPDRMVGGTLR--NRMKGTPAQGKVRAKTGSLS-TVSSLSGYAETKSGKKLVFSILL 439 (462)
T ss_dssp HHHTTS-TTHHHHHHH--SCBTTCSSHHHHGGGT--TSSTTSTTTTTEEEEEEEET-TEEEEEEEEECSSSCEEEEEEEE
T ss_pred HHHHHC-CCHHHHHHH--CCCCCCCCCCCCCCHH--HHCCCCCCCCEEEEEEEEEC-CCEEEEEEEECCCCCEEEEEEEE
T ss_conf 998859-207899972--9847887877687256--54247876774999975238-94685899998998999999995