HHsearch results for GI: 254780698 and protein with PDBid: 2v2f_F
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=98.32 E-value=8.7e-05 Score=46.17 Aligned_cols=140 Identities=12% Similarity=0.026 Sum_probs=72.3
Q ss_pred CCEEEEECCCCEEEEE-------C------C-C-CCCC-CCHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 3199999889628311-------3------6-9-9888-813879999999-9997555898855411153676124544
Q gi|254780698|r 54 YSSIVIDVNKNQMTGF-------K------Q-D-EPRY-PASLTKMMTLYI-IFEYLQSKKLHLNTQIPVSKTAATQNPS 116 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~-------K------n-~-~~~~-PASlTKlMTa~v-~le~i~~g~i~~~~~v~is~~a~~~~~s 116 (336)
.+++|||..||+||.- . | + ..++ |.|+-|.+|.|. ++| .|.+..+..+.....-....+.
T Consensus 66 ~a~vv~d~~TG~IlA~vg~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~~aaale---~g~~~~~~~~~~~~~~~~~~~~ 142 (390)
T 2v2f_F 66 VASTVVDVSNGKVIAQLGARHQASNVSFGTNQAVETNRDWGSAMKPITDYAPAIE---YGVYDSTATMVNDIPYNYPGTS 142 (390)
T ss_dssp EEEEEEETTTTEEEEEECCCC-----CCCCCTTTCCCSCCGGGGHHHHTHHHHHH---TTSCSBTTCEEEESCEECTTSS
T ss_pred EEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH---CCCCCCCEEEECCCCCCCCCCC
T ss_conf 8999998899949999967877767655643222056688741779999999997---6986664057526761015799
Q ss_pred CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCC----C--CCCCCCCC
Q ss_conf 32257885688302457889987777765455420100578999888768872661222002454----3--33344530
Q gi|254780698|r 117 KLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASG----L--HDKNQITT 190 (336)
Q Consensus 117 ~~~l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~G----l--~~~~~~tt 190 (336)
...-..+....-.--++-.+..|.|-.++-|++.++.+ .+-+.++.+|...-......+ + .......|
T Consensus 143 ~~~~n~~~~~~G~vtl~~Al~~S~N~~~~~l~~~~G~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~vt 216 (390)
T 2v2f_F 143 TPVYNWDRAYFGNITLQYALQQSRNVTAVETLNKVGLD------RAKTFLNGLGIDYPSMHYANAISSNTTESNKQYGAS 216 (390)
T ss_dssp CEECCTTSCCCEEEEHHHHHHTTCHHHHHHHHHHHCHH------HHHHHHHTTTCCCSSCCGGGGSCSCSSCCCTTSSCC
T ss_pred CCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCH------HHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 87430799857742299999863303788998753927------899999982999876444422232111058640458
Q ss_pred HHHHHHHHHHHC
Q ss_conf 134555554201
Q gi|254780698|r 191 ARDQAILGILLR 202 (336)
Q Consensus 191 a~Dla~l~~~~~ 202 (336)
+.+|+.....+.
T Consensus 217 plqma~ayaaia 228 (390)
T 2v2f_F 217 SEKMAAAYAAFA 228 (390)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999986