HHsearch results for GI: 254780698 and protein with PDBid: 3a3j_A
>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae}
Probab=100.00 E-value=0 Score=495.84 Aligned_cols=253 Identities=30% Similarity=0.465 Sum_probs=235.2
Q ss_pred CCCCCCCEEEEECCCCEEEEECCCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC---CCCCCCCCCCCC
Q ss_conf 148763199999889628311369988-8813879999999999755589885541115367612---454432257885
Q gi|254780698|r 49 HAKPKYSSIVIDVNKNQMTGFKQDEPR-YPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAAT---QNPSKLYLKEKT 124 (336)
Q Consensus 49 ~~~~~~sAiv~D~~tG~ILy~Kn~~~~-~PASlTKlMTa~v~le~i~~g~i~~~~~v~is~~a~~---~~~s~~~l~~g~ 124 (336)
+...+.||||||++||+|||+||++++ +|||+|||||+|+++|++++|++++++++++++.++. .++|.+++++|+
T Consensus 5 P~i~A~saiv~d~~tG~iL~~kn~~~~~~pASlTKlMTa~v~l~~i~~g~l~~~~~vtvs~~~~~~~~~~~s~~~l~~ge 84 (344)
T 3a3j_A 5 PQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNT 84 (344)
T ss_dssp CCCCSSEEEEEETTTCCEEEEESTTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCTTTCGGGCTTSCCCCCCTTC
T ss_pred CCCCCCEEEEEECCCCCEEHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCEEEECCCC
T ss_conf 85561399999999996902069098885399999999999999997499986788996499985058987325334897
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 68830245788998777776545542010057899988876887266122200245433334453013455555420136
Q gi|254780698|r 125 YFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILLRKN 204 (336)
Q Consensus 125 ~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta~Dla~l~~~~~~~ 204 (336)
+++++|||+++|++||||||++|||+++|++++|+++||++|++|||++|||.||+||++++|+|||+||++++++++++
T Consensus 85 ~~tv~dLL~~lll~S~NdAA~alAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~np~Gl~~~~~~ttA~Dla~l~~~~~~~ 164 (344)
T 3a3j_A 85 QVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 164 (344)
T ss_dssp EEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCSSCBCSSSSCCCCTTCBBCHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf 68899998777651388099999988089899999999999998388535887453235888766599999999998548
Q ss_pred CEEEEEEEEEEEEEECCEEEEEECHHC-CCCCCCEEEEECCCCCCCCEEEEEEEE-CCEEEEEEEECCCCHHHHHHHHHH
Q ss_conf 204677611565434786997210102-576870056522423337179999997-897999998179987899999999
Q gi|254780698|r 205 FPQYYKYFSIRKFRYRNRIITNHNKLL-NKMHNIDGIKTGYTRNSGFNIVTSLRY-KDDPIVAVVMGMPTSQERDQKALE 282 (336)
Q Consensus 205 ~p~~~~~~s~~~~~~~~~~~~n~N~lL-~~~~g~~G~KTG~T~~AG~clv~~a~~-~g~~lI~Vvlg~~s~~~R~~~~~~ 282 (336)
+|.+..+.+++.+++.+..+.++|.++ ..++|++|+|||||++||+|+++++.+ +|+++|+||||+++...||.|+++
T Consensus 165 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~KTG~t~~ag~~~~~~a~~~~~~~ii~Vvlg~~~~~~r~~d~~~ 244 (344)
T 3a3j_A 165 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVESKK 244 (344)
T ss_dssp CHHHHGGGGCCEEEETTEEEECSCGGGGCTTSEEEEEEEEEETTTEEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHH
T ss_conf 74114565588776511321355531346776744236554003677259998505860899999779982058999999
Q ss_pred HHHHHHCCCCCEEEEECCC
Q ss_conf 9999840154034320477
Q gi|254780698|r 283 LITSFLEKKTLKHQQTHRK 301 (336)
Q Consensus 283 Ll~~~f~~~~~~~~~~~~~ 301 (336)
|++|+|++|..+.......
T Consensus 245 L~~~~f~~y~~~~l~~~g~ 263 (344)
T 3a3j_A 245 LLQWGFANFETFKTLEAGK 263 (344)
T ss_dssp HHHHHHHHEEEEEEECTTC
T ss_pred HHHHHHHHCEEEEEECCCC
T ss_conf 9999885347999604897