HHsearch results for GI: 254780698 and protein with PDBid: 3fwm_A
>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A*
Probab=97.97 E-value=0.00069 Score=40.81 Aligned_cols=202 Identities=16% Similarity=0.092 Sum_probs=102.3
Q ss_pred CCEEEEECCCCEEEEE--C-C--------C-CC-CCCCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCHHHHCCCCCCCC
Q ss_conf 3199999889628311--3-6--------9-98-888138799999999997555898-855411153676124544322
Q gi|254780698|r 54 YSSIVIDVNKNQMTGF--K-Q--------D-EP-RYPASLTKMMTLYIIFEYLQSKKL-HLNTQIPVSKTAATQNPSKLY 119 (336)
Q Consensus 54 ~sAiv~D~~tG~ILy~--K-n--------~-~~-~~PASlTKlMTa~v~le~i~~g~i-~~~~~v~is~~a~~~~~s~~~ 119 (336)
.++|++|.+||+||.- . + + .. +.|.|+-|..+.+.+++. |.+ ++++.+.-.......++...+
T Consensus 419 gA~Vv~Dp~TGeIlAmvGg~~~~~~~fNra~~a~r~pGSt~KP~~y~aAL~~---g~~~~~~t~~~D~p~~~~~~~g~~~ 495 (751)
T 3fwm_A 419 TAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQ---PKIYRLNTWIADAPIALRQPNGQVW 495 (751)
T ss_dssp EEEEEEETTTCBEEEEECSSSCSSCSSCHHHHCCEECGGGGHHHHHHHHHTC---TTTCCTTCEEECSCCCEECSSSCEE
T ss_pred EEEEEEECCCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHC---CCCCCCCEEECCCCEEEECCCCCCC
T ss_conf 5899986899978999644423445555000134455554541789999973---8874453374267637757998531
Q ss_pred --------CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCH
Q ss_conf --------578856883024578899877777654554201005789998887688726612220024543333445301
Q gi|254780698|r 120 --------LKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTA 191 (336)
Q Consensus 120 --------l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta 191 (336)
......++ +.-.+..|-|..++-++..++-. .+-+.++++|..........++.-.....|+
T Consensus 496 ~p~n~d~~~~~~G~v~----l~~AL~~S~N~~~v~l~~~lG~~------~~~~~~~k~Gi~~~~~~~~ps~~lG~~~vTP 565 (751)
T 3fwm_A 496 SPQNDDRRYSESGRVM----LVDALTRSMNVPTVNLGMALGLP------AVTETWIKLGVPKDQLHPVPAMLLGALNLTP 565 (751)
T ss_dssp CCCCTTSCCCTTSEEE----HHHHHHTTCHHHHHHHHHHHCHH------HHHHHHHHHTCCGGGCCCSGGGGGTCCEECH
T ss_pred CCCCCCCCCCCCCCEE----HHHHHHHHHHHHHHHHHHHHCHH------HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCH
T ss_conf 7866776657876231----43343402359999998862808------9999999849985567898066538862578
Q ss_pred HHHHHHHHHHCCC----CEEEE-EEEEEE---EEEE--CCEEE------EEECHHC-------------CCCCC-CEEEE
Q ss_conf 3455555420136----20467-761156---5434--78699------7210102-------------57687-00565
Q gi|254780698|r 192 RDQAILGILLRKN----FPQYY-KYFSIR---KFRY--RNRII------TNHNKLL-------------NKMHN-IDGIK 241 (336)
Q Consensus 192 ~Dla~l~~~~~~~----~p~~~-~~~s~~---~~~~--~~~~~------~n~N~lL-------------~~~~g-~~G~K 241 (336)
.+||.....+... .|.+. ++.... -+.. ..... ...+.+| ...++ -.++|
T Consensus 566 lqmA~aYatiANgG~~~~P~~I~~I~d~dG~vi~~~~~~~~~vis~~tA~~v~~~M~~VV~~GTg~~~~~~~~~~~vAGK 645 (751)
T 3fwm_A 566 IEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGK 645 (751)
T ss_dssp HHHHHHHHHHHTTSEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHHHHHHHTSTTHHHHHHSGGGCCEEE
T ss_pred HHHHHHHHHHHCCCEEECCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEE
T ss_conf 89888999997498583568999999899988703689776368999999999999987555673001123899759998
Q ss_pred ECCCCCCCCE-EEEEEEECCEEEEEEEECCC
Q ss_conf 2242333717-99999978979999981799
Q gi|254780698|r 242 TGYTRNSGFN-IVTSLRYKDDPIVAVVMGMP 271 (336)
Q Consensus 242 TG~T~~AG~c-lv~~a~~~g~~lI~Vvlg~~ 271 (336)
||+|+...-. ||+. +++-.++|.+|-+
T Consensus 646 TGTT~~~rDaWFvG~---tp~~~~~VWvG~D 673 (751)
T 3fwm_A 646 TGTTNNNVDTWFAGI---DGSTVTITWVGRD 673 (751)
T ss_dssp EEECGGGSEEEEEEE---CSSEEEEEEEECT
T ss_pred CCCCCCCCEEEEEEC---CCCEEEEEEEECC
T ss_conf 863799705999985---8996999999778