HHsearch results for GI: 254780698 and protein with PDBid: 3fwm_A

>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A*
Probab=97.97  E-value=0.00069  Score=40.81  Aligned_cols=202  Identities=16%  Similarity=0.092  Sum_probs=102.3

Q ss_pred             CCEEEEECCCCEEEEE--C-C--------C-CC-CCCCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCHHHHCCCCCCCC
Q ss_conf             3199999889628311--3-6--------9-98-888138799999999997555898-855411153676124544322
Q gi|254780698|r   54 YSSIVIDVNKNQMTGF--K-Q--------D-EP-RYPASLTKMMTLYIIFEYLQSKKL-HLNTQIPVSKTAATQNPSKLY  119 (336)
Q Consensus        54 ~sAiv~D~~tG~ILy~--K-n--------~-~~-~~PASlTKlMTa~v~le~i~~g~i-~~~~~v~is~~a~~~~~s~~~  119 (336)
                      .++|++|.+||+||.-  . +        + .. +.|.|+-|..+.+.+++.   |.+ ++++.+.-.......++...+
T Consensus       419 gA~Vv~Dp~TGeIlAmvGg~~~~~~~fNra~~a~r~pGSt~KP~~y~aAL~~---g~~~~~~t~~~D~p~~~~~~~g~~~  495 (751)
T 3fwm_A          419 TAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQ---PKIYRLNTWIADAPIALRQPNGQVW  495 (751)
T ss_dssp             EEEEEEETTTCBEEEEECSSSCSSCSSCHHHHCCEECGGGGHHHHHHHHHTC---TTTCCTTCEEECSCCCEECSSSCEE
T ss_pred             EEEEEEECCCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHC---CCCCCCCEEECCCCEEEECCCCCCC
T ss_conf             5899986899978999644423445555000134455554541789999973---8874453374267637757998531


Q ss_pred             --------CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCH
Q ss_conf             --------578856883024578899877777654554201005789998887688726612220024543333445301
Q gi|254780698|r  120 --------LKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTA  191 (336)
Q Consensus       120 --------l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~~lGl~~t~f~np~Gl~~~~~~tta  191 (336)
                              ......++    +.-.+..|-|..++-++..++-.      .+-+.++++|..........++.-.....|+
T Consensus       496 ~p~n~d~~~~~~G~v~----l~~AL~~S~N~~~v~l~~~lG~~------~~~~~~~k~Gi~~~~~~~~ps~~lG~~~vTP  565 (751)
T 3fwm_A          496 SPQNDDRRYSESGRVM----LVDALTRSMNVPTVNLGMALGLP------AVTETWIKLGVPKDQLHPVPAMLLGALNLTP  565 (751)
T ss_dssp             CCCCTTSCCCTTSEEE----HHHHHHTTCHHHHHHHHHHHCHH------HHHHHHHHHTCCGGGCCCSGGGGGTCCEECH
T ss_pred             CCCCCCCCCCCCCCEE----HHHHHHHHHHHHHHHHHHHHCHH------HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCH
T ss_conf             7866776657876231----43343402359999998862808------9999999849985567898066538862578


Q ss_pred             HHHHHHHHHHCCC----CEEEE-EEEEEE---EEEE--CCEEE------EEECHHC-------------CCCCC-CEEEE
Q ss_conf             3455555420136----20467-761156---5434--78699------7210102-------------57687-00565
Q gi|254780698|r  192 RDQAILGILLRKN----FPQYY-KYFSIR---KFRY--RNRII------TNHNKLL-------------NKMHN-IDGIK  241 (336)
Q Consensus       192 ~Dla~l~~~~~~~----~p~~~-~~~s~~---~~~~--~~~~~------~n~N~lL-------------~~~~g-~~G~K  241 (336)
                      .+||.....+...    .|.+. ++....   -+..  .....      ...+.+|             ...++ -.++|
T Consensus       566 lqmA~aYatiANgG~~~~P~~I~~I~d~dG~vi~~~~~~~~~vis~~tA~~v~~~M~~VV~~GTg~~~~~~~~~~~vAGK  645 (751)
T 3fwm_A          566 IEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGK  645 (751)
T ss_dssp             HHHHHHHHHHHTTSEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHHHHHHHTSTTHHHHHHSGGGCCEEE
T ss_pred             HHHHHHHHHHHCCCEEECCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEE
T ss_conf             89888999997498583568999999899988703689776368999999999999987555673001123899759998


Q ss_pred             ECCCCCCCCE-EEEEEEECCEEEEEEEECCC
Q ss_conf             2242333717-99999978979999981799
Q gi|254780698|r  242 TGYTRNSGFN-IVTSLRYKDDPIVAVVMGMP  271 (336)
Q Consensus       242 TG~T~~AG~c-lv~~a~~~g~~lI~Vvlg~~  271 (336)
                      ||+|+...-. ||+.   +++-.++|.+|-+
T Consensus       646 TGTT~~~rDaWFvG~---tp~~~~~VWvG~D  673 (751)
T 3fwm_A          646 TGTTNNNVDTWFAGI---DGSTVTITWVGRD  673 (751)
T ss_dssp             EEECGGGSEEEEEEE---CSSEEEEEEEECT
T ss_pred             CCCCCCCCEEEEEEC---CCCEEEEEEEECC
T ss_conf             863799705999985---8996999999778