HHsearch results for GI: 254780698 and protein with PDBid: 3lo7_A
>3lo7_A PBPA, penicillin-binding protein A; transpeptidase domain, cell membrane, cell shape, cell WALL biogenesis/degradation, membrane; 2.05A {Mycobacterium tuberculosis}
Probab=98.07 E-value=0.00022 Score=43.81 Aligned_cols=135 Identities=11% Similarity=0.114 Sum_probs=79.2
Q ss_pred CCCEEEEECCCCEEEEE--C--------------------------------C-CC-CCC-CCHHHHHHHHHHHHHHHHC
Q ss_conf 63199999889628311--3--------------------------------6-99-888-8138799999999997555
Q gi|254780698|r 53 KYSSIVIDVNKNQMTGF--K--------------------------------Q-DE-PRY-PASLTKMMTLYIIFEYLQS 95 (336)
Q Consensus 53 ~~sAiv~D~~tG~ILy~--K--------------------------------n-~~-~~~-PASlTKlMTa~v~le~i~~ 95 (336)
+.++++||..||+||.- . | +. ..+ |.|+-|++|+..+||.
T Consensus 151 ~gavVvmdp~TG~ILAmvs~p~ydpn~~~~~~~~~~~~~~~~l~~~~~~pl~Nra~~~~y~PGStfK~~t~aaaLe~--- 227 (483)
T 3lo7_A 151 KGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAA--- 227 (483)
T ss_dssp CEEEEEECTTTCBEEEEEEESCCCHHHHTCSCHHHHHHHHHHHHHCTTCTTSCTTTSCCBCCGGGGHHHHHHHHHHT---
T ss_pred CEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHC---
T ss_conf 27999997899929999606888821013677411279998731464331014044125379884899999999980---
Q ss_pred CCCCCCCCCCCCHHHHCCCCCCCC--------CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 898855411153676124544322--------578856883024578899877777654554201005789998887688
Q gi|254780698|r 96 KKLHLNTQIPVSKTAATQNPSKLY--------LKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAK 167 (336)
Q Consensus 96 g~i~~~~~v~is~~a~~~~~s~~~--------l~~g~~~tv~dLl~~lli~S~NdAa~alAe~i~Gs~~~Fv~~MN~~A~ 167 (336)
|.+..+...... .....+.... ......++ +...+..|.|-..+-++..++. +.+.+.++
T Consensus 228 G~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~g~~~----l~~Al~~S~N~~f~~l~~~~G~------~~~~~~~~ 295 (483)
T 3lo7_A 228 GATETEQLTAAP--TIPLPGSTAQLENYGGAPCGDEPTVS----LREAFVKSCNTAFVQLGIRTGA------DALRSMAR 295 (483)
T ss_dssp TCCTTCEEECCS--BCCC-------BCC---CCSSSSEEE----HHHHHHTTCHHHHHHHHHHHCH------HHHHHHHH
T ss_pred CCCCEEEEECCC--CCCCCCCCCCCCCCCCCCCCCCCCCC----HHHHHHHHCCHHHHHHHHHHCC------HHHHHHHH
T ss_conf 985200010368--61136864211100254468987343----9999986042588899998394------03433577
Q ss_pred HHCCCCCCEECCCCCC-------------------CCCCCCCHHHHHHHHHHHC
Q ss_conf 7266122200245433-------------------3344530134555554201
Q gi|254780698|r 168 KIGMQNTIYKNASGLH-------------------DKNQITTARDQAILGILLR 202 (336)
Q Consensus 168 ~lGl~~t~f~np~Gl~-------------------~~~~~tta~Dla~l~~~~~ 202 (336)
.+|+.......+.++. ......|+..|+.....+.
T Consensus 296 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~siGqg~~~vTPlqma~a~aaiA 349 (483)
T 3lo7_A 296 AFGLDSPPRPTPLQVAESTVGPIPDSAALGMTSIGQKDVALTPLANAEIAATIA 349 (483)
T ss_dssp HTTTTSCCCCSSSCCCCCBCCCCCSHHHHHHHTTTCTTCBBCHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
T ss_conf 608998556776444434456533345432201104554467788777666542