RPSBLAST alignment for GI: 254780698 and conserved domain: PRK11669
>gnl|CDD|183269 PRK11669, pbpG, D-alanyl-D-alanine endopeptidase; Provisional. Length = 306
Score = 50.1 bits (120), Expect = 7e-07
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 54 YSSIVIDVNKNQ-MTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPV--SKTA 110
S++V+D+N N+ + D AS+TK+MT ++ + KL L+ ++ V S+T
Sbjct: 42 GSAMVVDLNTNKVIYSSNPDLVVPIASITKLMTAMVVLD----AKLPLDEKLKVDISQTP 97
Query: 111 ATQN-------PSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMS 163
+ S++ K+ +LAL++ S N + + G K F M+
Sbjct: 98 EMKGVYSRVRLNSEISRKDML-------LLALMS-SENRAAASLAHHYPGGYKAFIKAMN 149
Query: 164 NKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILLRKNFP-------QYYKYFSIRK 216
KAK +GM NT Y +GL N ++TARD L ++ K +P K + RK
Sbjct: 150 AKAKALGMTNTRYVEPTGLSIHN-VSTARDLTKL-LIASKQYPLIGQLSTTREKTATFRK 207
Query: 217 FRY----RNRIITNHNKLLNKMH-NIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVM 268
Y RN TNH L+ + + NI KTG+T +G +V + P+ VV+
Sbjct: 208 PNYTLPFRN---TNH--LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNRPVALVVL 259