RPSBLAST alignment of GI: 254780698 and protein with PDBid: 1es5
>1es5_A DD-transpeptidase; penicillin-binding, serine peptidase, beta-lactamase, hydrolase carboxypeptidase; 1.40A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1skf_A 1es2_A 1j9m_A 1esi_A 1es3_A 1es4_A Length = 262
Score = 162 bits (410), Expect = 1e-40
Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 28/259 (10%)
Query: 47 ELHAKPKYSSIVIDVNKNQ-MTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIP 105
+ A ++ + D R S TK+MT ++ L+L+ ++
Sbjct: 5 TIAAV---GGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLA---QSNLNLDAKVT 58
Query: 106 VSKT----AATQNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSE------ 155
+ K N S+ +L T Q + L+ S D + A +
Sbjct: 59 IQKAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARV 118
Query: 156 KKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILLRKNFPQYYKYFSIR 215
K F M+ A +G+ NT + + G+ + +T RD + KN + +
Sbjct: 119 KSFIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIASSAMKN-STFRTVVKTK 177
Query: 216 KFRYRNRIIT----------NHNKLLNKMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVA 265
+ + T N N LL+ G+KTG + + +V + ++
Sbjct: 178 AYTAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGAGPEAKYCLVFAATRGGKTVIG 237
Query: 266 VVMGMPTSQERDQKALELI 284
V+ + R+ A +++
Sbjct: 238 TVLASTSIPARESDATKIM 256