RPSBLAST alignment of GI: 254780698 and protein with PDBid: 1tvf

>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1 Length = 369
 Score =  126 bits (317), Expect = 7e-30
 Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 22/231 (9%)

Query: 72  DEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAATQN----PSKLYLKEKTYFT 127
           D    PAS+TK+MT+Y+  E +   +L L+  + ++      +     S   L     +T
Sbjct: 54  DTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWT 113

Query: 128 TEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHD--- 184
               +   ++ S+N  +    + +S +   F  LM+NKAK IGM+NT + N +G  +   
Sbjct: 114 IADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPTGAENSRL 173

Query: 185 -----------KNQITTARDQAILGILLRKNFPQYYKYFSIRKFRYRNRIITNH----NK 229
                      +  +TTARD AIL + + K  P+   +                      
Sbjct: 174 RSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYTFNFSLEG 233

Query: 230 LLNKMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERDQKA 280
               +   DG+KTG +  + +N   + +     I  V+MG    +    + 
Sbjct: 234 AKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEK 284