RPSBLAST alignment of GI: 254780698 and protein with PDBid: 3cjm
>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Enterococcus faecalis V583} Length = 282
Score = 108 bits (270), Expect = 2e-24
Identities = 24/234 (10%), Positives = 58/234 (24%), Gaps = 17/234 (7%)
Query: 53 KYSSIVIDVNKNQMTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQIPVSKTAAT 112
+D+ + Y AS K+ ++ + + S + IP +
Sbjct: 51 TVGISYLDLETGEQRSVNGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIPYNAEEDY 110
Query: 113 QNP-SKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMSNKAKKIGM 171
+ + + + + IT S N + + G K + K
Sbjct: 111 EEGTGIIAYNIQPEYPLKTLQEYAITYSDNIAKNMLYDTLGGDAKAKREMYQRYLHKTPS 170
Query: 172 QNTIYKNASGLHDKNQITTARDQAILGILLRKNFPQYYKYFSIRKFRYRNRIITNHNKLL 231
+ ++ D ++ L Y +I + + + +
Sbjct: 171 ------------IEEPQFSSEDALVILQKLYTEKATKPDYQAI--YDSMKQSVFHERMET 216
Query: 232 NKMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERDQKALELIT 285
K G + + L P + + + +T
Sbjct: 217 PTTQGKVAHKIGSYDEF-IHDMGIL-ETPHPFALAIFTKGPDNAKSAAFIASVT 268