RPSBLAST alignment of GI: 254780698 and protein with PDBid: 3mfd

>3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis} Length = 334

 Score =  168 bits (426), Expect = 2e-42
 Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 14/254 (5%)

Query: 45  ASELHAKPKYSSIVIDVNKNQ-MTGFKQDEPRYPASLTKMMTLYIIFEYLQSKKLHLNTQ 103
           A ++ AK   S+I+ID    + +    + + R  AS+TK+MT  +  E  +     ++  
Sbjct: 4   AIDVSAK---SAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIESGK-----MDQT 55

Query: 104 IPVSKTAATQNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFGEFISGSEKKFAILMS 163
           + VS  A     S +YL E      +  +  L+ RS ND + A  E + GS   F  +M+
Sbjct: 56  VTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMN 115

Query: 164 NKAKKIGMQNTIYKNASGLHDK-NQITTARDQAILGILLRKNFPQYYKYFSIRKFRYR-- 220
            KA+++GM+NT ++N  GL D  N  +TA D AIL          Y K    + ++    
Sbjct: 116 QKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTK-YAMKLKDYQKISGTKIYKAETM 174

Query: 221 NRIITNHNKLLNKMH-NIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVMGMPTSQERDQK 279
             +  N NKLL  ++    G KTGYT+ +   +V++       ++AV +  P   +   K
Sbjct: 175 ESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPNDWDDHMK 234

Query: 280 ALELITSFLEKKTL 293
               +    +   +
Sbjct: 235 MFNYVFEHYQTYLI 248