PSIBLAST alignment of GI: 254780700 and protein with PDB id: 3mh5
>gi|299856797|pdb|3MH5|A Chain A, Htra Proteases Are Activated By A Conserved Mechanism That Can Be Triggered By Distinct Molecular Cues Length = 456
>gi|299856798|pdb|3MH5|B Chain B, Htra Proteases Are Activated By A Conserved Mechanism That Can Be Triggered By Distinct Molecular Cues Length = 456
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 125/455 (27%), Positives = 212/455 (46%), Gaps = 17/455 (3%)
Query: 26 YLVLEAKLPPSSVDLPPVIARVSPSIVSVMVEPKKKVSVEQMFNAYGFGNLPEDHPLKNY 85
A L P++ +V PS+VS+ VE V+ +M + +D P
Sbjct: 1 AETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQ-QFFGDDSPFCQE 59
Query: 86 FRKDFHKFF---SGEEPILSDTVERLMFGSGFFITDD-GYILTSNHIVEDGASFSVILSD 141
F + + GSG I D GY++T+NH+V++ V LSD
Sbjct: 60 GSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSD 119
Query: 142 DTELPAKLVGTDALFDLAVLKVQSDRKFIPVEFEDANNIRVGEAVFTIGNPFRLRGTVSA 201
+ AK+VG D D+A++++Q+ + ++ D++ +RVG+ IGNPF L TV++
Sbjct: 120 GRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTS 179
Query: 202 GIVSALDRDIPD--RPGTFTQIDAPINQGNSGGPCFNALGHVIGVNAMIVTSGQFHMGVG 259
GIVSAL R + F Q DA IN+GNSGG N G +IG+N I+ ++G+G
Sbjct: 180 GIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIG 239
Query: 260 LIIPLSIIKKAIPSLISKGRVDHGWFGIMTQNLTQELAIPLGLRGTKGSLITAVVKESPA 319
IP +++K ++ G+V G GIM L ELA + + +G+ ++ V+ S A
Sbjct: 240 FAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSA 299
Query: 320 DKAGMKVGDVICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCKEGSKHSVAVVLGSSPT 379
KAG+K GDVI L+G+ I S Q+ + ++ + L ++G + +V + L +
Sbjct: 300 AKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQ--S 357
Query: 380 AKNDMHLEVGDKELLGMVLQDINDGNKKLVRIVALNPNREREVEAKGIQKGMTIVSVNTH 439
++N + + G + + K +V N G++KG I+ N
Sbjct: 358 SQNQVDSSSIFNGIEGAEMSN----KGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQ 413
Query: 440 EVSCIKDVERLIGKAKEKKRDSVLLQIKYDPDMQS 474
V I ++ +++ + K + L I+
Sbjct: 414 AVKNIAELRKVL----DSKPSVLALNIQRGDSTIY 444