RPSBLAST alignment for GI: 254780700 and conserved domain: TIGR02037

>gnl|CDD|162670 TIGR02037, degP_htrA_DO, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. Length = 428
 Score =  311 bits (800), Expect = 2e-85
 Identities = 144/437 (32%), Positives = 225/437 (51%), Gaps = 30/437 (6%)

Query: 39  DLPPVIARVSPSIVSVMVEPKKKVSVEQMFNAYGFGNLPEDHPLKNYFRKDFHKFFSGEE 98
              P++ +V+P++V++ VE   K                     + +F  D   F   + 
Sbjct: 2   SFAPLVEKVAPAVVNISVEGTVKRRNRPPAL---------PPFFRQFFGDDMPNFPRQQ- 51

Query: 99  PILSDTVERLMFGSGFFITDDGYILTSNHIVEDGASFSVILSDDTELPAKLVGTDALFDL 158
               +   R + GSG  I+ DGYILT+NH+V+     +V LSD  E  AKLVG D   D+
Sbjct: 52  ---RERKVRGL-GSGVIISADGYILTNNHVVDGADEITVTLSDGREFKAKLVGKDPRTDI 107

Query: 159 AVLKVQSDRKFIPVEFEDANNIRVGEAVFTIGNPFRLRGTVSAGIVSALDRDIP--DRPG 216
           AVLK+ + +    ++  D++ +RVG+ V  IGNPF L  TV++GIVSAL R         
Sbjct: 108 AVLKIDAKKNLPVIKLGDSDKLRVGDWVLAIGNPFGLGQTVTSGIVSALGRSGLGIGDYE 167

Query: 217 TFTQIDAPINQGNSGGPCFNALGHVIGVNAMIVTSGQFHMGVGLIIPLSIIKKAIPSLIS 276
            F Q DA IN GNSGGP  N  G VIG+N  I +    ++G+G  IP ++ K  +  LI 
Sbjct: 168 NFIQTDAAINPGNSGGPLVNLRGEVIGINTAIYSPSGGNVGIGFAIPSNMAKNVVDQLIE 227

Query: 277 KGRVDHGWFGIMTQNLTQELAIPLGLRGTKGSLITAVVKESPADKAGMKVGDVICMLDGR 336
            G+V  GW G+  Q +T +LA  LGL   +G+L+  V+  SPA+KAG+K GDVI  ++G+
Sbjct: 228 GGKVQRGWLGVTIQEVTSDLAKSLGLEKQRGALVAQVLPGSPAEKAGLKAGDVILSVNGK 287

Query: 337 IIKSHQDFVWQIASRSPKEQVKISLCKEGSKHSVAVVLGSSPTAKNDMHLEVGDKELLGM 396
            I S  D    I +  P ++V + + ++G + ++ V LG+SP  +            LG+
Sbjct: 288 PISSFADLRRAIGTLKPGKKVTLGILRKGKEKTITVTLGASPEEQAS-----SSNPFLGL 342

Query: 397 VLQDINDGNKKLVR-------IVALNPNREREVEAKGIQKGMTIVSVNTHEVSCIKDVER 449
            + +++   +K +R       +V