RPSBLAST alignment for GI: 254780700 and conserved domain: cd00986

>gnl|CDD|29043 cd00986, PDZ_LON_protease, PDZ domain of ATP-dependent LON serine proteases. Most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this bacterial subfamily of protease-associated PDZ domains a C-terminal beta-strand is thought to form the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.. Length = 79
 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 306 KGSLITAVVKESPADKAGMKVGDVICMLDGRIIKSHQDFVWQIASRSPKEQVKISLCKEG 365
            G  +T+VV+  PA    +K GD I  +DG+  K  ++ +  I S+   + VK+ + +E 
Sbjct: 8   HGVYVTSVVEGMPA-AGKLKAGDHIIAVDGKPFKEAEELIDYIQSKKEGDTVKLKVKREE 66

Query: 366 SKHSVAVVLGSSP 378
            +    ++L + P
Sbjct: 67  KELPEDLILKTFP 79