HHsearch alignment for GI: 254780701 and conserved domain: COG2172

>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].
Probab=97.83  E-value=0.00047  Score=53.67  Aligned_cols=92  Identities=26%  Similarity=0.310  Sum_probs=65.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCC----CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             79899998877765568860679----88799999997698599999878997898785442265231577767899988
Q gi|254780701|r  363 ADEKGMRQVILNLLSNAVKFTAI----GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGV  438 (495)
Q Consensus       363 ~D~~~L~qvl~NLi~NAiK~T~~----gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~Gt  438 (495)
T Consensus        36 ~~~~~l~~av~E~~~N~v~Ha~~~~~~~g~I~i~~~~-~~~~~~i~i~D~G~~~~~~--~~~~~~~~---~~-~~~~~~~  108 (146)
T COG2172          36 VDIADLAIAVSEALTNAVKHAYKLDPSEGEIRIEVSL-DDGKLEIRIWDQGPGIEDL--EESLGPGD---TT-AEGLQEG  108 (146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCCH--HHHCCCCC---CC-CCCCCCC
T ss_conf             8999999999999989999763038998659999997-0993999999579898788--88538888---88-8753247


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf             805899999999619859999798995
Q gi|254780701|r  439 GLGLPIAQSIMANHGGQFLIRSKLREG  465 (495)
Q Consensus       439 GLGLaIvk~lve~hgG~i~v~S~~G~G  465 (495)
T Consensus       109 G~Gl~l~~~~~D----~~~~~~~~~~~  131 (146)
T COG2172         109 GLGLFLAKRLMD----EFSYERSEDGR  131 (146)
T ss_pred             CCCHHHHHHHHE----EEEEEEECCCC
T ss_conf             313788862110----79999606985