HHsearch alignment for GI: 254780701 and conserved domain: COG2172
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].
Probab=97.83 E-value=0.00047 Score=53.67 Aligned_cols=92 Identities=26% Similarity=0.310 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCC----CCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 79899998877765568860679----88799999997698599999878997898785442265231577767899988
Q gi|254780701|r 363 ADEKGMRQVILNLLSNAVKFTAI----GGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGV 438 (495)
Q Consensus 363 ~D~~~L~qvl~NLi~NAiK~T~~----gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~Gt 438 (495)
T Consensus 36 ~~~~~l~~av~E~~~N~v~Ha~~~~~~~g~I~i~~~~-~~~~~~i~i~D~G~~~~~~--~~~~~~~~---~~-~~~~~~~ 108 (146)
T COG2172 36 VDIADLAIAVSEALTNAVKHAYKLDPSEGEIRIEVSL-DDGKLEIRIWDQGPGIEDL--EESLGPGD---TT-AEGLQEG 108 (146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE-CCCEEEEEEEECCCCCCCH--HHHCCCCC---CC-CCCCCCC
T ss_conf 8999999999999989999763038998659999997-0993999999579898788--88538888---88-8753247
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 805899999999619859999798995
Q gi|254780701|r 439 GLGLPIAQSIMANHGGQFLIRSKLREG 465 (495)
Q Consensus 439 GLGLaIvk~lve~hgG~i~v~S~~G~G 465 (495)
T Consensus 109 G~Gl~l~~~~~D----~~~~~~~~~~~ 131 (146)
T COG2172 109 GLGLFLAKRLMD----EFSYERSEDGR 131 (146)
T ss_pred CCCHHHHHHHHE----EEEEEEECCCC
T ss_conf 313788862110----79999606985