HHsearch alignment for GI: 254780701 and conserved domain: COG4191
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].
Probab=100.00 E-value=3.2e-31 Score=286.55 Aligned_cols=239 Identities=24% Similarity=0.371 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999--988999997764201389999999998503368789378999999999999999999
Q gi|254780701|r 227 ELEVAKSLSDETRKRAEEENL--AKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNL 304 (495)
Q Consensus 227 ~l~~~~~~~~~a~~~ae~a~~--~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~L 304 (495)
T Consensus 360 er~~ae~~LR~~QdeLvQA~kLA~LGQmSA~iaHElNQPLaaiRt~adna~~-lLergr~e~a~~Nl~~I~~LteRma~I 438 (603)
T COG4191 360 EREQAEAALRRAQDELVQAGKLAALGQMSAGIAHELNQPLAAIRTYADNARL-LLERGRTEEARENLERISALTERMAAI 438 (603)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8887899999878999987778998888888788743708999867778999-987588677776799999999999889
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999998742200156531011999999999999999973112210003676101047989999887776556886067
Q gi|254780701|r 305 INEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTA 384 (495)
Q Consensus 305 i~~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~ 384 (495)
T Consensus 439 t~~Lk~FArk~~~----a~~~v~l~~ai~~Al~ll~~R~~~~~~~l~~~~~~~~~~V~~~~iRLeQVLvNLl~NALDA~~ 514 (603)
T COG4191 439 TAHLKSFARKSRD----AAGPVSLREAIEGALELLRGRLRAAGVELELDLPDAPLWVMANEIRLEQVLVNLLQNALDAMA 514 (603)
T ss_pred HHHHHHHHCCCCC----CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999998336766----667765799999999998876413676265048987755641322099999999998999845
Q ss_pred --CCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf --988799999997698599999878997898785442265231577767899988805899999999619859999798
Q gi|254780701|r 385 --IGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKL 462 (495)
Q Consensus 385 --~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~ 462 (495)
T Consensus 515 ~~~~~~i~i~~~-~~~~~v~l~VrDnGpGi~~e~~~~lFePF~T----tK~~~~GLGLGLaIS~~i~~d~GGsL~v~n~~ 589 (603)
T COG4191 515 GQEDRRLSIRAQ-REGGQVVLTVRDNGPGIAPEALPHLFEPFFT----TKPVGKGLGLGLAISQNIARDLGGSLEVANHP 589 (603)
T ss_pred CCCCCEEEEEEE-ECCCEEEEEECCCCCCCCHHHHHHHCCCCCC----CCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 887871699987-1598699998269999897899861377503----67666775602898998999818807940278
Q ss_pred CCCEEEEEEECHH
Q ss_conf 9952988984724
Q gi|254780701|r 463 REGVEVIAILPNT 475 (495)
Q Consensus 463 G~Gt~f~v~LP~~ 475 (495)
T Consensus 590 ~~Ga~F~i~L~~a 602 (603)
T COG4191 590 EGGASFTIELRRA 602 (603)
T ss_pred CCCEEEEEEEECC
T ss_conf 8844899996157