HHsearch alignment for GI: 254780701 and conserved domain: COG4192
>COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms].
Probab=99.93 E-value=1.2e-21 Score=204.37 Aligned_cols=215 Identities=24% Similarity=0.337 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 89999977642013899999999985033687893789999999999999999999999999874220015653101199
Q gi|254780701|r 250 SRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLI 329 (495)
Q Consensus 250 s~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~ 329 (495)
T Consensus 452 GqTmTslaHEinQPLnAmsaYLFsA~~A-~e~~~s~qa~~~L~kie~L~eR~~~Iv~sLRqF~Rk~s~~~--~lqpV~L~ 528 (673)
T COG4192 452 GQTMTSLAHEINQPLNAMSAYLFSARLA-LEEAPSAQAATSLDKIENLTERMGKIVNSLRQFARKNSSDE--SLQPVRLN 528 (673)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHH
T ss_conf 7788888988557568899999987888-85174588998999887799999999999999975257778--76411099
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCC-CEEEEEEEEECCCEEEEEEEEC
Q ss_conf 999999999999997311221000367610104798999988777655688606798-8799999997698599999878
Q gi|254780701|r 330 DIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIG-GRVHVTVGWTSGRGQYISIKDN 408 (495)
Q Consensus 330 ~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~g-G~V~v~~~~~~~~~~~i~V~Dt 408 (495)
T Consensus 529 ~~v~~AweLl~~khk~rQ~~Li~pt--D~~~V~gd~v~ieQVlvNl~~NaldA~~h~~p~i~~~~~~~~~e~l~i~i~Dn 606 (673)
T COG4192 529 SVVEQAWELLQTKHKRRQIKLINPT--DDLMVMGDAVSIEQVLVNLIVNALDASTHFAPWIKLIALGTEQEMLRIAIIDN 606 (673)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCC--CCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECC
T ss_conf 9999999999854200024423776--53000001564999999999988866415786279986427642158998448
Q ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHH
Q ss_conf 9978987854422652315777678999888058999999996198599997989952988984724
Q gi|254780701|r 409 GPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNT 475 (495)
Q Consensus 409 G~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~ 475 (495)
T Consensus 607 GqGwp~~l~dkLl~PFt------tsK~vgLGlGLSIsqSlmeqmqG~l~lAStLt~nA~ViL~f~v~ 667 (673)
T COG4192 607 GQGWPHELVDKLLTPFT------TSKEVGLGLGLSISQSLMEQMQGRLALASTLTKNAMVILEFQVD 667 (673)
T ss_pred CCCCCHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEEC
T ss_conf 99984567788607766------43100555325678999998427444865513574899998413