HHsearch alignment for GI: 254780701 and conserved domain: COG5385

>COG5385 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=94.24  E-value=0.54  Score=27.42  Aligned_cols=194  Identities=16%  Similarity=0.137  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             99997764201389999999998503368789378999999999999999999999999987422001565310119999
Q gi|254780701|r  252 FLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLIDI  331 (495)
Q Consensus       252 FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~l  331 (495)
T Consensus        18 LcsRvCHDiISPvgAInnGLeLLdeg~---ad----dDAm~LIrsSArnas----~rLqFaR~AFGAsgSag~~iDtgea   86 (214)
T COG5385          18 LCSRVCHDIISPVGAINNGLELLDEGG---AD----DDAMDLIRSSARNAS----VRLQFARLAFGASGSAGASIDTGEA   86 (214)
T ss_pred             HHHHHHHHCCCCHHHHHCHHHHHCCCC---CC----HHHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf             999887540481777603256642689---64----789999999765178----8877889872555543335660669


Q ss_pred             HHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCC
Q ss_conf             99999999999973112210003676101047989999887776556886067988799999997698599999878997
Q gi|254780701|r  332 VRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPG  411 (495)
Q Consensus       332 i~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~G  411 (495)
T Consensus        87 e-k~A~~~~--a~ek-pe~~W~g~r~--~~~Kn~---vkllLNl~lia~~aiPrGG~~~vtle~-~e~d~rfsi~akG~m  156 (214)
T COG5385          87 E-KAAQDFF--ANEK-PELTWNGPRA--ILPKNR---VKLLLNLFLIAYGAIPRGGSLVVTLEN-PETDARFSIIAKGRM  156 (214)
T ss_pred             H-HHHHHHH--HCCC-CCCCCCCCHH--HCCCCH---HHHHHHHHHHHCCCCCCCCEEEEEEEC-CCCCCEEEEEECCCC
T ss_conf             9-9999998--6238-7123558742--247505---899999999970557889826899536-776743899832753


Q ss_pred             --CCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEC
Q ss_conf             --89878544226523157776789998880589999999961985999979899529889847
Q gi|254780701|r  412 --IAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILP  473 (495)
Q Consensus       412 --I~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP  473 (495)
T Consensus       157 ~Rvppk~lel~-----~G~~~-eE~vdahsVQpyYt~lLa~eAgm~I~v~~~-~e~iv~~A~v~  213 (214)
T COG5385         157 MRVPPKFLELH-----SGEPP-EEAVDAHSVQPYYTLLLAEEAGMTISVHAT-AERIVFTAWVV  213 (214)
T ss_pred             CCCCHHHHHHH-----CCCCC-CCCCCCCCCCHHHHHHHHHHCCCEEEEEEC-CCEEEEEEECC
T ss_conf             44798998650-----59984-224787530399999999970986899963-64379997514