HHsearch alignment for GI: 254780701 and conserved domain: KOG0519

Probab=99.84  E-value=5.5e-22  Score=207.38  Aligned_cols=235  Identities=29%  Similarity=0.336  Sum_probs=203.1

Q ss_pred             HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999889--99997764201389999999998503368789378999999999999999999999999987
Q gi|254780701|r  236 DETRKRAEEENLAKSR--FLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSR  313 (495)
Q Consensus       236 ~~a~~~ae~a~~~Ks~--FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsr  313 (495)
T Consensus       206 ~~~~~~~e~~~~~~sq~~~~~~~sHeir~p~~~--~~~~~~~----~t~~~~~~~~~~~~~~~~~~~~~s~ln~i~d~~~  279 (786)
T KOG0519         206 QKKLASDEAAVWSPSQKGFLATLSHEIRTPLNG--GMLGGLS----DTDLDSDQRLILNTDRVSAKSLLSLLNDILDLSK  279 (786)
T ss_pred             HHHHCCCCCHHCCCCCHHCCCCCCCEEECCCCC--CCCCEEE----CCCCCHHHHHHHCCCHHHHHCHHHHHHHHHHHCC
T ss_conf             566512530002742011134456324434445--6641220----3442156898743001220000137777640113


Q ss_pred             HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCH-HCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             4220015653101199999999999999997311221000367610-104798999988777655688606798879999
Q gi|254780701|r  314 IEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLS-SVWADEKGMRQVILNLLSNAVKFTAIGGRVHVT  392 (495)
Q Consensus       314 leag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~-~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~  392 (495)
T Consensus       280 v~~g~~~l~~~rf~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~de~~~~qv~~n~v~naik~t~~-~~i~~~  358 (786)
T KOG0519         280 VESGKGELVAKRFDLRTLLNFVISLLSELSQAKYAILVLDLSSGVPRNVRGDEARLRQVIANLVSNAIKFTHA-GHLEES  358 (786)
T ss_pred             CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC-CCEEEE
T ss_conf             5323554032234526666777877666551367346520787776420356101100033320144354446-622466


Q ss_pred             EEEECCC-----------------------------------------------EEEEEEEECCCCCCHHHHHH-HCCCC
Q ss_conf             9997698-----------------------------------------------59999987899789878544-22652
Q gi|254780701|r  393 VGWTSGR-----------------------------------------------GQYISIKDNGPGIAEGEIPT-VLTSF  424 (495)
Q Consensus       393 ~~~~~~~-----------------------------------------------~~~i~V~DtG~GI~~e~~~~-iF~~F  424 (495)
T Consensus       359 ~~~~~~~~~~~~~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~  438 (786)
T KOG0519         359 VIAREELSESNDVLLRAKEEAHMAGKARIDFLQKMSHAMRAPRHNIISLLSLLLQDIVLSPDSGLEIQTVMRSSNVFTSL  438 (786)
T ss_pred             EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECCCCCEEEEECCCCHHHHHHH
T ss_conf             65121100467899754577653515566788874133124220421223576652022366640685023304655545


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHHC
Q ss_conf             31577767899988805899999999619859999798995298898472470
Q gi|254780701|r  425 GQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNTRV  477 (495)
Q Consensus       425 ~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~~~  477 (495)
T Consensus       439 ~q~~~~~~~~~~gt~~~~~i~~~l~~l~~~~~~~~~~~~~~~t~~~~~~~~~~  491 (786)
T KOG0519         439 IQADPDITRLYGGTGLGESIVFSLVELMSGEISDISCISLGKTFSFTLDLLTN  491 (786)
T ss_pred             HCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             14661003456876453322232889988674321100347522233123568