HHsearch alignment for GI: 254780701 and conserved domain: PRK04184
>PRK04184 DNA topoisomerase VI subunit B; Validated.
Probab=98.32 E-value=9e-06 Score=68.39 Aligned_cols=107 Identities=19% Similarity=0.276 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCC---EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCC------CCCCCCCCCC
Q ss_conf 7989999887776556886067988---799999997698599999878997898785442265------2315777678
Q gi|254780701|r 363 ADEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTS------FGQGSIAIKS 433 (495)
Q Consensus 363 ~D~~~L~qvl~NLi~NAiK~T~~gG---~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~------F~r~~~~~~~ 433 (495)
T Consensus 31 ~~~ral~ttvkE~VdNsLDAcEe~gILPdI~v~I~~~~~~~y~v~VeDNGpGI~~~~ip~vFGk~L~GSKf~~~rQ--sR 108 (533)
T PRK04184 31 SPARALYTTVKELVDNSLDACEEAGILPDIKVEIRRVGEDYYRVIVEDNGPGIPPEQIPKVFGKLLYGSKFHRLRQ--SR 108 (533)
T ss_pred CCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHH--CC
T ss_conf 8531799999999733176688608898659999983785699999448899886788899988850253240211--47
Q ss_pred CCCCCCCHHHHHHHHHHHCCC-EEEEEEECCCCEE-EEEEEC
Q ss_conf 999888058999999996198-5999979899529-889847
Q gi|254780701|r 434 AEQGVGLGLPIAQSIMANHGG-QFLIRSKLREGVE-VIAILP 473 (495)
Q Consensus 434 ~~~GtGLGLaIvk~lve~hgG-~i~v~S~~G~Gt~-f~v~LP 473 (495)
T Consensus 109 Gq--qGiGis~avlysQlTTGkP~~V~S~~~~~~~a~~~~l~ 148 (533)
T PRK04184 109 GQ--QGIGISAAVLYAQMTTGKPVRVISSTGGSKKAYEFELK 148 (533)
T ss_pred CC--CCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf 75--35247888777631268865999647998526999999