HHsearch alignment for GI: 254780701 and conserved domain: PRK10337
>PRK10337 sensor protein QseC; Provisional.
Probab=100.00 E-value=4.6e-44 Score=396.65 Aligned_cols=235 Identities=23% Similarity=0.331 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998899999776420138999999999850336878937899999999999999999999
Q gi|254780701|r 227 ELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLIN 306 (495)
Q Consensus 227 ~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~ 306 (495)
T Consensus 212 El~~L~~a~N~ml~rl~~~~~~~r~F~adaAHELRTPLt~i~~~~e~~~~~~---~~~~~~~~~l~~i~~~~~rl~~lv~ 288 (446)
T PRK10337 212 EVRPLVEALNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSD---DDPQARKKALLQLHSGIDRATRLVD 288 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999999999999788875168999999999984279---9989999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999874220015653101199999999999999997311221000367610104798999988777655688606798
Q gi|254780701|r 307 EILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIG 386 (495)
Q Consensus 307 ~lLdlsrleag~~~l~~~~v~L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~g 386 (495)
T Consensus 289 ~LL~Lar~d~~~~~~~~~~v~l~~l~~~~v~~~~~~a~~~~i~l~~~~~~~~~~~~~d~~ll~~~l~NLl~NAikytp~g 368 (446)
T PRK10337 289 QLLTLSRLDSLDNLQDVAEIPLEDLLQSAVMDIYHTAQQAKIDVRLTLNAHGIKRTGQPLLLSLLVRNLLDNAVRYSPQG 368 (446)
T ss_pred HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99998775446565678175299999999999999999759779996288770671689999999999999999748999
Q ss_pred CEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCE
Q ss_conf 87999999976985999998789978987854422652315777678999888058999999996198599997989952
Q gi|254780701|r 387 GRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGV 466 (495)
Q Consensus 387 G~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt 466 (495)
T Consensus 369 ~~I~v~~~~--~---~l~V~D~G~GIp~e~~~~iFeRFyR~~~---~~~~GsGLGLaIV~~I~~~hgG~i~l~~~~~GG~ 440 (446)
T PRK10337 369 SVVDVTLNA--R---NFTVRDNGPGVTPEALARIGERFYRPPG---QTATGSGLGLSIVQRIAKLHGMNVSFGNAEEGGF 440 (446)
T ss_pred CEEEEEEEC--C---EEEEEECCCCCCHHHHHHHCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEE
T ss_conf 769999980--7---7999976999999999874279706999---9999826749999999998199899997898927
Q ss_pred EEEEEE
Q ss_conf 988984
Q gi|254780701|r 467 EVIAIL 472 (495)
Q Consensus 467 ~f~v~L 472 (495)
T Consensus 441 ~~~vt~ 446 (446)
T PRK10337 441 EAKVSW 446 (446)
T ss_pred EEEEEC
T ss_conf 999969