HHsearch alignment for GI: 254780701 and conserved domain: PRK10600

>PRK10600 nitrate/nitrite sensor protein NarX; Provisional.
Probab=99.70  E-value=8.9e-13  Score=128.43  Aligned_cols=202  Identities=17%  Similarity=0.201  Sum_probs=144.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             98899999776420138999999999850336878937899999999999999999999999998742200156531011
Q gi|254780701|r  248 AKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAIS  327 (495)
Q Consensus       248 ~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~  327 (495)
T Consensus       361 ER~~IARELHDslaQ~Ls~Lkiq~~~l~~~~--~~~~~~~~~~l~~i~~~~~~a~~~lReLl~~fR~-------~l~~~~  431 (569)
T PRK10600        361 ERATIARELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTFRL-------QLTEPG  431 (569)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCCCC
T ss_conf             9999999988887222789999999999730--5798889999999999999999999999998355-------777566


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCC-HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEE
Q ss_conf             9999999999999999731122100036761010479-899998877765568860679887999999976985999998
Q gi|254780701|r  328 LIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWAD-EKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIK  406 (495)
Q Consensus       328 L~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D-~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~  406 (495)
T Consensus       432 l~~aL~~~i~~~~~---~~g~~i~l~~~~~~~~l~~~~~i~l~rIvqEALsNv~KHA~A-~~v~V~l~~-~~~~~~l~I~  506 (569)
T PRK10600        432 LRPALEASCEEFSA---RFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHAQA-SEVVVTVAQ-NDNQVKLSVQ  506 (569)
T ss_pred             HHHHHHHHHHHHHH---HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEE-CCCEEEEEEE
T ss_conf             79999999999997---609779999558866798789999999999999999970899-879999997-6998999998


Q ss_pred             ECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHHCCCCC
Q ss_conf             789978987854422652315777678999888058999999996198599997989952988984724707469
Q gi|254780701|r  407 DNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNTRVLNFI  481 (495)
Q Consensus       407 DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~~~~~~~  481 (495)
T Consensus       507 DdG~Gf~~~------------------~~~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~f~P~~~~~~~  563 (569)
T PRK10600        507 DNGCGVPEN------------------AERSNHYGLIIMRDRAQSLRGDCSVRRRESGGTEVVVTFIPEKTFTDV  563 (569)
T ss_pred             ECCCCCCCC------------------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCC
T ss_conf             899898988------------------888999781599999997699899986699958999997589887413