HHsearch alignment for GI: 254780701 and conserved domain: TIGR01386
>TIGR01386 cztS_silS_copS heavy metal sensor kinase; InterPro: IPR006290 Members of this family contain a sensor histidine kinase domain (IPR003661 from INTERPRO) and a domain found in bacterial signal proteins (IPR003660 from INTERPRO). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. ; GO: 0000155 two-component sensor activity, 0016775 phosphotransferase activity nitrogenous group as acceptor, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=100.00 E-value=2.8e-45 Score=406.91 Aligned_cols=253 Identities=27% Similarity=0.404 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 99998889999999999999999999999999998899999776420138999999999850336878937899999999
Q gi|254780701|r 215 LSCQAEKDDLIAELEVAKSLSDETRKRAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDI 294 (495)
Q Consensus 215 l~~~~e~~~l~~~l~~~~~~~~~a~~~ae~a~~~Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i 294 (495)
T Consensus 227 L~~RL~~~~~P~EL~~l~~~FNaML~RLEd~f~rLs~FSaDlAHElRTPltNL~~~tQVaLS~---~R~~~eY~e~l~sn 303 (483)
T TIGR01386 227 LSQRLDESRLPAELRELAQSFNAMLDRLEDAFQRLSQFSADLAHELRTPLTNLLGQTQVALSR---PRSGEEYREVLESN 303 (483)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHEEECC---CCCHHHHHHHHHHH
T ss_conf 677898124786689999999999888999999997317145666401254456650020056---88988999999861
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHHHHHHHHHHHCC--CCCEECCCCCCHHCCCCHHHHHHH
Q ss_conf 999999999999999998742200156531011999999-99999999997311--221000367610104798999988
Q gi|254780701|r 295 HRSGQHLLNLINEILDLSRIEAGRYELSESAISLIDIVR-ECIIMLQLRAQEKN--IEIFQKIDPSLSSVWADEKGMRQV 371 (495)
Q Consensus 295 ~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~li~-~~~~~~~~~A~~~~--~~l~~~~~~~~~~v~~D~~~L~qv 371 (495)
T Consensus 304 lEEl~RL~rMv~DMLFLAraD~~~~~~~~~~ldL~ae~~l~~~~~fE~lAee~~Piv~l~v~G~P--~~~~gD~~lfrRA 381 (483)
T TIGR01386 304 LEELERLSRMVEDMLFLARADNGRLALEREELDLAAELALKVAEYFEPLAEERGPIVSLRVEGEP--AEVRGDALLFRRA 381 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC--CEEECCHHHHHHH
T ss_conf 89999999999899989985234567778751278888788887742027678866899983242--0560247888999
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHH
Q ss_conf 77765568860679887999999976985999998789978987854422652315777678-99988805899999999
Q gi|254780701|r 372 ILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKS-AEQGVGLGLPIAQSIMA 450 (495)
Q Consensus 372 l~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~-~~~GtGLGLaIvk~lve 450 (495)
T Consensus 382 ~sNLLsNA~rhtp~g~~I~v~~~~-~~d~~~~~v~N~G~~Ip~e~L~rLFdRFYR~D~aR~~G~~~g~GLGLAIV~SI~~ 460 (483)
T TIGR01386 382 LSNLLSNALRHTPAGSTIDVRVER-RADEVRVSVENTGDGIPPEHLSRLFDRFYRVDPARSNGSQEGTGLGLAIVRSIME 460 (483)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 999999998608998858999961-4775689983587999852356555300267633327664567604899999998
Q ss_pred HCCCEEEEEEECCCCEEEEEEEC
Q ss_conf 61985999979899529889847
Q gi|254780701|r 451 NHGGQFLIRSKLREGVEVIAILP 473 (495)
Q Consensus 451 ~hgG~i~v~S~~G~Gt~f~v~LP 473 (495)
T Consensus 461 ~HGG~~~aeS~~~~~t~F~l~fp 483 (483)
T TIGR01386 461 AHGGRAEAESEADGKTRFKLRFP 483 (483)
T ss_pred HCCCEEEEEECCCCEEEEEEECC
T ss_conf 23986899864892489876339