>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase; InterPro: IPR014265 Proteins in this entry are putative periplasmic sensor signal transduction histidine kinases. They all contain a GAF domain that is present in phytochromes and cGMP-specific phosphodiesterases, and which has been experimentally proven to be involved in protein:protein interactions. They also contain a C-terminal histidine kinase domain, which is composed of a dimerisation sub-domain and an ATP/ADP-binding phosphotransfer, or catalytic, sub-domain. The proteins in this entry are found strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria, where members of IPR014264 from INTERPRO and IPR014266 from INTERPRO also occur..

Probab=99.97 E-value=1.8e-28 Score=262.93 Aligned_cols=199 Identities=21% Similarity=0.340 Sum_probs=167.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHH Q ss_conf 7764201389999999998503368789378999999999999999999999999987422001-565310119999999 Q gi|254780701|r 256 MSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRY-ELSESAISLIDIVRE 334 (495) Q Consensus 256 ~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~-~l~~~~v~L~~li~~ 334 (495) T Consensus 493 vVHDLKNLvaQLSL~---l~NA~~Hk~NPeFq~DmL~Tv~~~v~RM~~ll~qL------r~~~~p~~~~~~~~l~~L~~~ 563 (696) T TIGR02916 493 VVHDLKNLVAQLSLL---LRNAERHKDNPEFQDDMLETVESAVNRMKKLLAQL------REKGLPEEEKKTVDLVDLLRR 563 (696) T ss_pred EEEHHHHHHHHHHHH---HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCCCHHHHEEHHHHHHHH T ss_conf 110258999999999---99887417896689999998999999999999997------306897405641038999999 Q ss_pred HHHHHHHHHHHCCCCCEECC-CCC-CHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCC Q ss_conf 99999999973112210003-676-1010479899998877765568860679887999999976985999998789978 Q gi|254780701|r 335 CIIMLQLRAQEKNIEIFQKI-DPS-LSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGI 412 (495) Q Consensus 335 ~~~~~~~~A~~~~~~l~~~~-~~~-~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI 412 (495) T Consensus 564 ~~~~k~----~q~p~~e~~~~~~~~rl~~~a~~erl~rV~gHL~QNAlEAT~~~G~V~~~~~~~~~~~a~i~i~D~G~GM 639 (696) T TIGR02916 564 VIASKR----AQQPRPEVSIEDTDFRLSVRADRERLERVLGHLVQNALEATPEEGRVKIRVERECGGAAVIEIEDSGCGM 639 (696) T ss_pred HHHHHH----HCCCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCC T ss_conf 999986----3189448997175417888752888999999999988860499962899987418882279998657899 Q ss_pred CHHH-HHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEC Q ss_conf 9878-5442265231577767899-98880589999999961985999979899529889847 Q gi|254780701|r 413 AEGE-IPTVLTSFGQGSIAIKSAE-QGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILP 473 (495) Q Consensus 413 ~~e~-~~~iF~~F~r~~~~~~~~~-~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP 473 (495) T Consensus 640 ~~~FiR~rLF~PF~------tTK~~aGMGIG~YE~~~yv~e~GG~i~V~S~pG~Gt~ftl~LP 696 (696) T TIGR02916 640 SEAFIRERLFKPFD------TTKGNAGMGIGVYECRQYVEELGGRIEVESTPGKGTIFTLVLP 696 (696) T ss_pred CHHHHHHHCCCCCC------CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC T ss_conf 85899840789975------4456678720189999999983890588863588548887449

HHsearch alignment for GI: 254780701 and conserved domain: TIGR02916